Variant report
Variant | rs12281273 |
---|---|
Chromosome Location | chr11:56755659-56755660 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11228815 | 1.00[YRI][hapmap];0.84[AFR][1000 genomes] |
rs11228820 | 0.84[AFR][1000 genomes] |
rs11228843 | 0.80[AFR][1000 genomes] |
rs11228844 | 0.85[AFR][1000 genomes] |
rs11228845 | 0.85[AFR][1000 genomes] |
rs11228848 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11228849 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11228897 | 1.00[AMR][1000 genomes] |
rs11228906 | 1.00[AMR][1000 genomes] |
rs11501558 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs12270396 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs12273568 | 0.89[AFR][1000 genomes] |
rs12273672 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs12274917 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs12275463 | 1.00[AFR][1000 genomes] |
rs12283109 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs12288998 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs12291606 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs12292674 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv832162 | chr11:56716658-56901528 | Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats | TF binding regionCpG islandChromatin interactive region | 8 gene(s) | inside rSNPs | diseases |
No data |