Variant report

Variant rs1230382
Chromosome Location chr5:96254354-96254355
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:96218000-96264600 Weak transcription Right Ventricle heart
2 chr5:96218600-96259600 Weak transcription HMEC breast
3 chr5:96221600-96269200 Weak transcription Fetal Brain Male brain
4 chr5:96222000-96268600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr5:96222400-96258200 Weak transcription Stomach Mucosa stomach
6 chr5:96225600-96266400 Weak transcription Gastric stomach
7 chr5:96229600-96269600 Weak transcription Aorta Aorta
8 chr5:96229800-96256800 Weak transcription NHEK skin
9 chr5:96229800-96256800 Weak transcription Osteobl bone
10 chr5:96229800-96257000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr5:96229800-96270000 Weak transcription Esophagus oesophagus
12 chr5:96232600-96258400 Weak transcription Brain Hippocampus Middle brain
13 chr5:96233000-96255600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
14 chr5:96233000-96256200 Strong transcription Primary T cells fromperipheralblood blood
15 chr5:96233800-96256000 Strong transcription Primary B cells from peripheral blood blood
16 chr5:96234200-96255600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr5:96237400-96269200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr5:96237800-96265000 Weak transcription Fetal Muscle Leg muscle
19 chr5:96238400-96256800 Weak transcription NHDF-Ad bronchial
20 chr5:96239400-96256800 Weak transcription HSMM muscle
21 chr5:96239400-96257200 Weak transcription NHLF lung
22 chr5:96239800-96268000 Weak transcription Colonic Mucosa Colon
23 chr5:96240600-96256800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr5:96242000-96259800 Weak transcription Fetal Stomach stomach
25 chr5:96242200-96255600 Strong transcription Primary T helper cells fromperipheralblood blood
26 chr5:96242200-96256000 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr5:96242200-96268000 Weak transcription Primary neutrophils fromperipheralblood blood
28 chr5:96243400-96257200 Strong transcription Primary T regulatory cells fromperipheralblood blood
29 chr5:96243600-96255000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr5:96243600-96266400 Weak transcription Brain Angular Gyrus brain
31 chr5:96243800-96256000 Strong transcription Fetal Thymus thymus
32 chr5:96244200-96258600 Weak transcription Brain Cingulate Gyrus brain
33 chr5:96245200-96256600 Weak transcription Rectal Smooth Muscle rectum
34 chr5:96245400-96258200 Weak transcription Small Intestine intestine
35 chr5:96245400-96259600 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr5:96245400-96259800 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr5:96245600-96255800 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr5:96245800-96256600 Weak transcription HUVEC blood vessel
39 chr5:96245800-96256800 Weak transcription Colon Smooth Muscle Colon
40 chr5:96245800-96258600 Weak transcription Ovary ovary
41 chr5:96245800-96264600 Weak transcription Left Ventricle heart
42 chr5:96246000-96256800 Weak transcription Stomach Smooth Muscle stomach
43 chr5:96246000-96258000 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr5:96246000-96268200 Weak transcription Fetal Intestine Small intestine
45 chr5:96246000-96270200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr5:96247400-96258200 Weak transcription Fetal Lung lung
47 chr5:96247400-96259600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr5:96248400-96256000 Strong transcription Duodenum Mucosa Duodenum
49 chr5:96248400-96256200 Strong transcription Dnd41 blood
50 chr5:96249000-96255000 Strong transcription Primary T helper naive cells from peripheral blood blood

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