Variant report

Variant rs2549784
Chromosome Location chr5:96231520-96231521
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:96212600-96232000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr5:96213000-96239000 Weak transcription Pancreas Pancrea
3 chr5:96213400-96237800 Weak transcription Brain Substantia Nigra brain
4 chr5:96213400-96243800 Weak transcription HepG2 liver
5 chr5:96213400-96247000 Weak transcription Fetal Lung lung
6 chr5:96217600-96241600 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr5:96217600-96250000 Weak transcription Fetal Muscle Trunk muscle
8 chr5:96217800-96237800 Weak transcription NHDF-Ad bronchial
9 chr5:96218000-96237000 Weak transcription NHLF lung
10 chr5:96218000-96264600 Weak transcription Right Ventricle heart
11 chr5:96218200-96232000 Weak transcription Brain Anterior Caudate brain
12 chr5:96218200-96237000 Weak transcription Hela-S3 cervix
13 chr5:96218600-96259600 Weak transcription HMEC breast
14 chr5:96221000-96236600 Weak transcription Fetal Intestine Small intestine
15 chr5:96221600-96269200 Weak transcription Fetal Brain Male brain
16 chr5:96221800-96235600 Weak transcription Right Atrium heart
17 chr5:96221800-96242200 Strong transcription Dnd41 blood
18 chr5:96222000-96268600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr5:96222400-96231800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
20 chr5:96222400-96242600 Strong transcription Fetal Thymus thymus
21 chr5:96222400-96247200 Weak transcription Psoas Muscle Psoas
22 chr5:96222400-96258200 Weak transcription Stomach Mucosa stomach
23 chr5:96222600-96232000 Strong transcription Primary T cells fromperipheralblood blood
24 chr5:96223200-96240400 Strong transcription Liver Liver
25 chr5:96223400-96231600 Strong transcription Monocytes-CD14+_RO01746 blood
26 chr5:96223600-96240600 Strong transcription Duodenum Mucosa Duodenum
27 chr5:96224000-96231600 Strong transcription Primary hematopoietic stem cells blood
28 chr5:96225200-96244600 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr5:96225600-96235800 Weak transcription Lung lung
30 chr5:96225600-96236600 Weak transcription Spleen Spleen
31 chr5:96225600-96245200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr5:96225600-96266400 Weak transcription Gastric stomach
33 chr5:96226200-96244000 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr5:96226400-96237000 Weak transcription Placenta Placenta
35 chr5:96227800-96231800 Strong transcription Rectal Mucosa Donor 29 rectum
36 chr5:96227800-96232600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr5:96228400-96232800 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr5:96229000-96232400 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr5:96229200-96245400 Weak transcription HSMMtube muscle
40 chr5:96229400-96232000 Strong transcription Duodenum Smooth Muscle Duodenum
41 chr5:96229600-96235800 Weak transcription Ovary ovary
42 chr5:96229600-96236400 Weak transcription Fetal Stomach stomach
43 chr5:96229600-96236600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr5:96229600-96237000 Weak transcription Stomach Smooth Muscle stomach
45 chr5:96229600-96238600 Weak transcription HSMM muscle
46 chr5:96229600-96238800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr5:96229600-96239000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr5:96229600-96245000 Weak transcription NH-A brain
49 chr5:96229600-96269600 Weak transcription Aorta Aorta
50 chr5:96229800-96232000 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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