Variant report

Variant	rs7713127
Chromosome Location	chr5:96288138-96288139
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr5:96270110..96272375-chr5:96284966..96288783,4	MCF-7	breast:
2	chr5:96284801..96287176-chr5:96287402..96289918,2	K562	blood:
3	chr5:96284878..96287176-chr5:96288100..96289918,2	K562	blood:
4	chr5:96284375..96286567-chr5:96287719..96289798,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000113441	Chromatin interaction
ENSG00000247121	Chromatin interaction

Extended variants
information (count: 178 )
Associated
traits (count: 18 )

rSNPs within LD-proxies of this variant (count:170)

rs_ID	r²[population]
rs10044354	0.85[CEU][hapmap]
rs10051637	0.85[CEU][hapmap];0.82[EUR][1000 genomes]
rs10061936	0.92[EUR][1000 genomes]
rs10069361	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs10071975	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10076136	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1019503	0.89[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10434708	0.81[ASN][1000 genomes]
rs10434709	0.81[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs1046396	0.82[EUR][1000 genomes]
rs1056893	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11135482	0.91[CHB][hapmap];0.95[JPT][hapmap]
rs11135483	0.81[ASN][1000 genomes]
rs11135484	0.81[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs11135485	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11750025	0.81[ASN][1000 genomes]
rs1216565	0.96[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1216568	0.88[EUR][1000 genomes]
rs1216569	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1216570	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12189125	0.81[ASN][1000 genomes]
rs1230381	0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1230382	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12516666	0.82[CEU][hapmap];0.91[CHB][hapmap];0.87[JPT][hapmap];0.86[ASN][1000 genomes]
rs12654015	0.81[ASN][1000 genomes]
rs12716486	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13163165	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13167902	0.81[CEU][hapmap];0.85[CHB][hapmap];0.90[JPT][hapmap]
rs13170029	0.81[EUR][1000 genomes]
rs13189819	0.81[ASN][1000 genomes]
rs1363974	0.85[CEU][hapmap]
rs1363975	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1363977	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1423357	0.86[CEU][hapmap]
rs1423566	0.82[EUR][1000 genomes]
rs1423568	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1559267	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1559354	0.81[ASN][1000 genomes]
rs1559355	0.82[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.80[ASN][1000 genomes]
rs17087165	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs171647	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1820149	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs187265	0.96[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs193993	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs193994	0.93[EUR][1000 genomes]
rs1974871	0.91[CHB][hapmap];0.95[JPT][hapmap]
rs1981846	0.92[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.85[YRI][hapmap];0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2042383	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2042385	0.96[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2112974	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2113050	0.92[CEU][hapmap];0.85[JPT][hapmap];0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2113189	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2113190	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2113191	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2161548	0.86[CEU][hapmap]
rs2161657	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2161658	0.96[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2247650	0.86[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2248374	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2255546	0.96[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2255633	0.96[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2255634	0.96[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2255637	0.96[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2278018	0.82[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs2278019	0.81[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.81[ASN][1000 genomes]
rs2287988	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2351010	0.85[CEU][hapmap]
rs2432141	0.80[EUR][1000 genomes]
rs248215	1.00[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs251339	0.86[CEU][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs251342	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs251344	0.96[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2548520	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2548521	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2548522	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2548523	0.96[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2548524	0.96[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2548526	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2548527	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2548528	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2548529	0.89[CEU][hapmap];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2548533	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2548534	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2548535	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2548536	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2548537	0.96[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2548538	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2548539	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2548540	0.96[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2549781	0.96[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.80[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2549782	0.96[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2549784	0.92[CEU][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2549785	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2549786	0.83[EUR][1000 genomes]
rs2549787	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2549788	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2549789	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2549790	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2549791	0.96[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2549792	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2549795	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2549796	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2549797	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2549798	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2549799	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2549800	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2549801	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2617434	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs27290	0.85[CEU][hapmap]
rs27292	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs27294	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs27296	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs27299	0.83[EUR][1000 genomes]
rs27300	0.85[CEU][hapmap]
rs27305	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs27397	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs27436	0.93[CEU][hapmap]
rs27613	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs2762	0.84[CEU][hapmap];0.82[EUR][1000 genomes]
rs27621	0.85[EUR][1000 genomes]
rs27659	0.86[CEU][hapmap]
rs27747	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2910686	0.82[CEU][hapmap];0.89[CHB][hapmap];0.95[JPT][hapmap];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2910688	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2910787	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs2910788	0.82[EUR][1000 genomes]
rs2910789	0.82[EUR][1000 genomes]
rs2927608	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3096167	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs31398	0.87[EUR][1000 genomes]
rs33934033	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3734015	0.82[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.86[ASN][1000 genomes]
rs38030	0.87[EUR][1000 genomes]
rs38033	0.86[CEU][hapmap]
rs38034	0.81[CEU][hapmap]
rs38035	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs38036	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs38037	0.83[AFR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs38040	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs38041	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs38042	0.93[CEU][hapmap];0.83[JPT][hapmap];0.88[YRI][hapmap];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs38043	0.86[CEU][hapmap]
rs3849750	0.96[CEU][hapmap];0.96[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3909451	0.85[CEU][hapmap]
rs39602	0.86[CEU][hapmap]
rs42983	0.88[EUR][1000 genomes]
rs4360063	0.86[CEU][hapmap];0.82[JPT][hapmap]
rs4869311	0.81[ASN][1000 genomes]
rs4869312	0.81[ASN][1000 genomes]
rs4869313	0.80[ASN][1000 genomes]
rs4869314	0.82[CEU][hapmap];0.95[CHB][hapmap];0.86[ASN][1000 genomes]
rs56197090	0.86[ASN][1000 genomes]
rs6556943	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6859160	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6868302	0.81[ASN][1000 genomes]
rs6870825	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6871162	0.85[CEU][hapmap];0.82[EUR][1000 genomes]
rs6873441	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6874656	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6879678	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6887500	0.81[EUR][1000 genomes]
rs7700332	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7703341	0.81[EUR][1000 genomes]
rs7716222	0.85[CEU][hapmap]
rs7721944	0.81[ASN][1000 genomes]
rs7722694	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7726445	0.82[EUR][1000 genomes]
rs7731592	0.86[CEU][hapmap];0.82[EUR][1000 genomes]
rs7736466	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9127	0.88[CEU][hapmap];0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432755	chr5:95987984-96657483	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
2	nsv598962	chr5:96057891-96893164	Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
3	nsv948703	chr5:96078309-96368839	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
4	nsv1027472	chr5:96081592-96337550	Strong transcription Genic enhancers Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
5	nsv1028741	chr5:96082401-96372165	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
6	nsv949058	chr5:96082433-96390619	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
7	nsv598963	chr5:96084776-96363407	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
8	nsv531967	chr5:96127842-96302702	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases

mRNA abundance (count:18)

SNP	Gene	Cis/trans	Tissue	Source
rs7713127	ERAP2	cis	Artery Tibial	GTEx
rs7713127	LRAP	Cis_1M	lymphoblastoid	RTeQTL
rs7713127	ERAP2	cis	Heart Left Ventricle	GTEx
rs7713127	ERAP2	cis	Stomach	GTEx
rs7713127	LRAP	cis	normal skin	skin_eQTL
rs7713127	ERAP2	cis	Thyroid	GTEx
rs7713127	ERAP2	cis	Adipose Subcutaneous	GTEx
rs7713127	ERAP2	cis	Nerve Tibial	GTEx
rs7713127	LNPEP	cis	normal skin	skin_eQTL
rs7713127	ERAP2	cis	Whole Blood	GTEx
rs7713127	ERAP2	cis	Muscle Skeletal	GTEx
rs7713127	LRAP	cis	lesional skin	skin_eQTL
rs7713127	ERAP2	cis	Artery Aorta	GTEx
rs7713127	ERAP2	cis	Skin Sun Exposed Lower leg	GTEx
rs7713127	LRAP	cis	uninvolved skin	skin_eQTL
rs7713127	ERAP2	cis	Esophagus Mucosa	GTEx
rs7713127	ERAP2	cis	Esophagus Muscularis	GTEx
rs7713127	ERAP2	cis	lung	GTEx

Chromatin state (count:69 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:96273000-96299200	Weak transcription	Aorta	Aorta
2	chr5:96273400-96292800	Weak transcription	K562	blood
3	chr5:96273800-96289600	Weak transcription	Fetal Kidney	kidney
4	chr5:96273800-96291200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr5:96274400-96288200	Weak transcription	Brain Cingulate Gyrus	brain
6	chr5:96274600-96288800	Weak transcription	Duodenum Mucosa	Duodenum
7	chr5:96274600-96293000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
8	chr5:96274600-96298400	Weak transcription	HSMM	muscle
9	chr5:96274800-96288400	Weak transcription	HepG2	liver
10	chr5:96277000-96288400	Weak transcription	Psoas Muscle	Psoas
11	chr5:96277800-96303800	Weak transcription	Pancreas	Pancrea
12	chr5:96278000-96296000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr5:96278200-96292400	Weak transcription	Monocytes-CD14+_RO01746	blood
14	chr5:96278200-96314400	Weak transcription	Fetal Intestine Large	intestine
15	chr5:96279000-96290400	Enhancers	Primary T helper cells PMA-I stimulated	--
16	chr5:96279800-96298400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr5:96279800-96303800	Weak transcription	Esophagus	oesophagus
18	chr5:96282000-96292000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
19	chr5:96282200-96292800	Weak transcription	NHLF	lung
20	chr5:96282200-96303800	Weak transcription	Spleen	Spleen
21	chr5:96282400-96288200	Weak transcription	NHEK	skin
22	chr5:96282400-96288800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr5:96283400-96288400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
24	chr5:96283400-96296600	Weak transcription	NHDF-Ad	bronchial
25	chr5:96284800-96290200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
26	chr5:96285200-96288200	Weak transcription	Left Ventricle	heart
27	chr5:96285200-96292800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
28	chr5:96285400-96288800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
29	chr5:96285400-96291000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
30	chr5:96285400-96292000	Weak transcription	Fetal Thymus	thymus
31	chr5:96285400-96293000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
32	chr5:96285400-96296000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr5:96285400-96304400	Weak transcription	Fetal Intestine Small	intestine
34	chr5:96286000-96288600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr5:96286200-96288200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr5:96286200-96288200	Weak transcription	Primary T cells fromperipheralblood	blood
37	chr5:96286200-96293000	Weak transcription	Thymus	Thymus
38	chr5:96286400-96303800	Weak transcription	Right Ventricle	heart
39	chr5:96286600-96288400	Weak transcription	Skeletal Muscle Female	skeletal muscle
40	chr5:96286800-96291400	Weak transcription	Primary hematopoietic stem cells	blood
41	chr5:96287400-96288200	Enhancers	Duodenum Smooth Muscle	Duodenum
42	chr5:96287400-96290400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
43	chr5:96287400-96290400	Enhancers	Primary T helper cells fromperipheralblood	blood
44	chr5:96287800-96290200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
45	chr5:96287800-96292800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
46	chr5:96288000-96288200	Enhancers	Primary B cells from peripheral blood	blood
47	chr5:96288000-96288200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
48	chr5:96288000-96288200	Enhancers	Rectal Smooth Muscle	rectum
49	chr5:96288000-96288400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
50	chr5:96288000-96288400	Strong transcription	Primary B cells from cord blood	blood

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