Variant report

Variant rs27659
Chromosome Location chr5:96343552-96343553
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:96304800-96346600 Weak transcription Lung lung
2 chr5:96304800-96359600 Weak transcription Hela-S3 cervix
3 chr5:96314000-96360200 Weak transcription Fetal Brain Male brain
4 chr5:96314200-96343600 Strong transcription Primary B cells from peripheral blood blood
5 chr5:96314200-96344000 Strong transcription Primary B cells from cord blood blood
6 chr5:96314200-96347600 Strong transcription Fetal Thymus thymus
7 chr5:96314400-96343800 Strong transcription Dnd41 blood
8 chr5:96314800-96343800 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr5:96315400-96374800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr5:96315600-96353400 Weak transcription Pancreas Pancrea
11 chr5:96315600-96358600 Weak transcription Brain Substantia Nigra brain
12 chr5:96316000-96360000 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr5:96316400-96346600 Weak transcription NH-A brain
14 chr5:96320000-96357600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr5:96321200-96344600 Strong transcription Primary T regulatory cells fromperipheralblood blood
16 chr5:96321600-96344800 Weak transcription Small Intestine intestine
17 chr5:96322200-96348600 Weak transcription Fetal Kidney kidney
18 chr5:96322200-96349800 Weak transcription Psoas Muscle Psoas
19 chr5:96322400-96353600 Weak transcription Right Ventricle heart
20 chr5:96322400-96358600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr5:96322400-96359600 Weak transcription Gastric stomach
22 chr5:96326400-96346600 Weak transcription Placenta Amnion Placenta Amnion
23 chr5:96329800-96358800 Weak transcription Brain Germinal Matrix brain
24 chr5:96330000-96359800 Weak transcription Aorta Aorta
25 chr5:96330400-96359400 Weak transcription Fetal Brain Female brain
26 chr5:96330600-96353600 Weak transcription Esophagus oesophagus
27 chr5:96331600-96344600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr5:96331600-96356200 Weak transcription Fetal Stomach stomach
29 chr5:96331600-96357800 Weak transcription Spleen Spleen
30 chr5:96331800-96349800 Weak transcription HSMM muscle
31 chr5:96333400-96344600 Strong transcription GM12878-XiMat blood
32 chr5:96333600-96374000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr5:96333800-96344000 Strong transcription Primary T cells fromperipheralblood blood
34 chr5:96333800-96372800 Strong transcription Placenta Placenta
35 chr5:96334400-96346400 Weak transcription HMEC breast
36 chr5:96334800-96351800 Weak transcription A549 lung
37 chr5:96335000-96344800 Weak transcription Fetal Heart heart
38 chr5:96335800-96359600 Weak transcription Stomach Mucosa stomach
39 chr5:96336000-96352400 Weak transcription NHEK skin
40 chr5:96336200-96357800 Weak transcription Fetal Intestine Small intestine
41 chr5:96336600-96355400 Weak transcription Stomach Smooth Muscle stomach
42 chr5:96336600-96359400 Weak transcription Brain Inferior Temporal Lobe brain
43 chr5:96336600-96359400 Weak transcription Colonic Mucosa Colon
44 chr5:96336800-96349400 Weak transcription NHLF lung
45 chr5:96336800-96350200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr5:96336800-96350600 Weak transcription HSMMtube muscle
47 chr5:96336800-96355200 Weak transcription Colon Smooth Muscle Colon
48 chr5:96337000-96344800 Weak transcription K562 blood
49 chr5:96337000-96349800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr5:96337600-96355200 Weak transcription Rectal Smooth Muscle rectum

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