Variant report

Variant	rs2762
Chromosome Location	chr5:96273298-96273299
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:8)
CpG islands
(count:0)
Chromatin interactive
region (count:5)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:8 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOS	chr5:96273223-96273571	MCF10A-Er-Src	breast:	n/a	n/a
2	POLR2A	chr5:96269090-96273351	GM12878	blood:	n/a	n/a
3	JUN	chr5:96273030-96273888	K562	blood:	n/a	chr5:96273761-96273773
4	FOS	chr5:96273211-96273571	MCF10A-Er-Src	breast:	n/a	n/a
5	JUND	chr5:96273273-96273454	K562	blood:	n/a	n/a
6	FOS	chr5:96273253-96273453	MCF10A-Er-Src	breast:	n/a	n/a
7	FOS	chr5:96273181-96273588	HUVEC	blood vessel:	n/a	n/a
8	IRF1	chr5:96272439-96273409	K562	blood:	n/a	n/a

No data

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:96272582..96274239-chr5:96286288..96288115,2	K562	blood:
2	chr5:96270050..96274625-chr5:96293478..96297387,4	MCF-7	breast:
3	chr5:96038474..96039975-chr5:96271296..96273305,2	MCF-7	breast:
4	chr5:96272346..96274929-chr5:96377055..96379060,2	K562	blood:
5	chr5:96207193..96215079-chr5:96269183..96273335,11	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-LNPEP-1	chr5:96271698-96273470	NONHSAT102916

No data

Variant related genes	Relation type
ENSG00000247121	TF binding region
ENSG00000227836	TF binding region
ENSG00000164308	Chromatin interaction
ENSG00000113441	Chromatin interaction
ENSG00000153113	Chromatin interaction
ENSG00000247121	Chromatin interaction

Extended variants
information (count: 179 )
Associated
traits (count: 19 )

rSNPs within LD-proxies of this variant (count:171)

rs_ID	r²[population]
rs10038651	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10044354	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.96[LWK][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10051637	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.96[LWK][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];0.85[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10058476	0.80[CEU][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10061936	0.89[AFR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10069361	1.00[ASW][hapmap];0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];0.96[LWK][hapmap];0.91[MKK][hapmap];0.85[YRI][hapmap];0.95[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10071975	0.84[CEU][hapmap]
rs10077945	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1046395	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1046396	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10476696	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1056893	0.94[ASW][hapmap];0.80[CEU][hapmap];0.84[LWK][hapmap];0.84[MKK][hapmap];0.82[YRI][hapmap];0.83[AFR][1000 genomes]
rs1216565	0.89[YRI][hapmap];0.91[AFR][1000 genomes]
rs1216566	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1216567	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1216568	0.81[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs1216569	0.90[AFR][1000 genomes]
rs1216570	0.89[AFR][1000 genomes]
rs1216571	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1230358	0.83[TSI][hapmap]
rs12716486	0.88[CEU][hapmap]
rs13170029	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13358339	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1363907	0.85[CEU][hapmap];0.82[CHD][hapmap];0.88[TSI][hapmap];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1363908	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1363974	0.94[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.98[LWK][hapmap];0.99[MKK][hapmap];0.95[TSI][hapmap];0.85[YRI][hapmap];0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1363975	0.87[AFR][1000 genomes]
rs1363976	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1363977	0.87[AFR][1000 genomes]
rs1423357	0.92[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap];0.85[YRI][hapmap];0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1423566	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1423568	0.81[AFR][1000 genomes]
rs1477364	0.81[CEU][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1544777	0.81[CEU][hapmap];0.88[EUR][1000 genomes]
rs17087165	0.83[AFR][1000 genomes]
rs171647	0.81[AFR][1000 genomes]
rs18059	0.95[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.83[LWK][hapmap];0.84[ASN][1000 genomes]
rs1820148	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs187265	0.80[CEU][hapmap];0.82[YRI][hapmap];0.81[AFR][1000 genomes]
rs193994	0.83[AFR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2042385	0.80[CEU][hapmap]
rs2113189	0.81[CEU][hapmap]
rs2113191	0.83[AFR][1000 genomes]
rs2161548	0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.85[YRI][hapmap];0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2161657	0.80[CEU][hapmap]
rs2161658	0.80[CEU][hapmap];0.82[YRI][hapmap];0.81[AFR][1000 genomes]
rs2247650	0.82[YRI][hapmap]
rs2255546	0.94[ASW][hapmap];0.80[CEU][hapmap];0.85[LWK][hapmap];0.84[MKK][hapmap];0.82[YRI][hapmap];0.87[AFR][1000 genomes]
rs2255633	0.80[CEU][hapmap];0.81[YRI][hapmap];0.87[AFR][1000 genomes]
rs2255634	0.80[CEU][hapmap];0.82[YRI][hapmap];0.87[AFR][1000 genomes]
rs2255637	0.80[CEU][hapmap];0.81[YRI][hapmap];0.87[AFR][1000 genomes]
rs2287988	0.94[ASW][hapmap];0.80[CEU][hapmap];0.85[LWK][hapmap];0.84[MKK][hapmap];0.82[YRI][hapmap];0.81[AFR][1000 genomes]
rs2351010	1.00[ASW][hapmap];0.92[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.98[LWK][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];0.85[YRI][hapmap];0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2351011	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2432141	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2432142	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs248215	0.84[CEU][hapmap]
rs251340	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs251341	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs251344	0.80[CEU][hapmap]
rs2548224	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2548226	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2548516	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2548520	0.84[AFR][1000 genomes]
rs2548521	0.83[AFR][1000 genomes]
rs2548523	0.80[CEU][hapmap];0.82[YRI][hapmap];0.83[AFR][1000 genomes]
rs2548524	0.80[CEU][hapmap];0.82[YRI][hapmap];0.84[AFR][1000 genomes]
rs2548526	0.81[AFR][1000 genomes]
rs2548527	0.80[CEU][hapmap]
rs2548528	0.81[AFR][1000 genomes]
rs2548530	0.81[CEU][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2548532	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2548533	0.94[ASW][hapmap];0.80[CEU][hapmap];0.85[LWK][hapmap];0.84[MKK][hapmap];0.82[YRI][hapmap];0.81[AFR][1000 genomes]
rs2548534	0.81[AFR][1000 genomes]
rs2548537	0.81[YRI][hapmap]
rs2548538	0.82[YRI][hapmap]
rs2548540	0.80[CEU][hapmap];0.81[YRI][hapmap]
rs2549778	0.83[TSI][hapmap]
rs2549781	0.80[CEU][hapmap]
rs2549782	0.94[ASW][hapmap];0.80[CEU][hapmap];0.85[LWK][hapmap];0.86[MKK][hapmap];0.81[YRI][hapmap]
rs2549783	0.81[CEU][hapmap];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2549785	0.94[ASW][hapmap];0.80[CEU][hapmap];0.85[LWK][hapmap];0.84[MKK][hapmap];0.81[YRI][hapmap]
rs2549788	0.81[AFR][1000 genomes]
rs2549789	0.83[AFR][1000 genomes]
rs2549790	0.81[YRI][hapmap];0.83[AFR][1000 genomes]
rs2549792	0.83[AFR][1000 genomes]
rs2549794	0.81[CEU][hapmap];0.83[CHD][hapmap];0.90[TSI][hapmap];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2549795	0.94[ASW][hapmap];0.80[CEU][hapmap];0.85[LWK][hapmap];0.84[MKK][hapmap];0.82[YRI][hapmap];0.83[AFR][1000 genomes]
rs2549796	0.80[CEU][hapmap]
rs2549797	0.94[ASW][hapmap];0.80[CEU][hapmap];0.85[LWK][hapmap];0.84[MKK][hapmap];0.82[YRI][hapmap];0.83[AFR][1000 genomes]
rs2549798	0.81[AFR][1000 genomes]
rs2549800	0.87[AFR][1000 genomes]
rs2549801	0.87[AFR][1000 genomes]
rs2617434	0.87[AFR][1000 genomes]
rs2617435	0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2617439	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2617447	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs27289	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs27290	0.94[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.93[LWK][hapmap];0.96[MKK][hapmap];0.97[TSI][hapmap];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs27293	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs27294	0.84[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.82[ASN][1000 genomes]
rs27295	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs27296	0.84[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.83[ASN][1000 genomes]
rs27298	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs27299	0.83[ASN][1000 genomes]
rs27300	0.94[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[JPT][hapmap];0.91[LWK][hapmap];0.96[MKK][hapmap];0.88[TSI][hapmap];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs27302	0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs27306	0.81[CEU][hapmap];0.83[CHD][hapmap];0.90[TSI][hapmap];0.86[EUR][1000 genomes]
rs27307	0.81[CEU][hapmap];0.83[CHD][hapmap];0.90[TSI][hapmap];0.86[EUR][1000 genomes]
rs27397	0.84[CEU][hapmap]
rs27436	0.87[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs27613	1.00[ASW][hapmap];0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];0.91[LWK][hapmap];0.85[MKK][hapmap];0.85[ASN][1000 genomes]
rs27621	0.83[ASN][1000 genomes]
rs27659	0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs27660	0.85[EUR][1000 genomes]
rs27711	0.81[CEU][hapmap];0.83[CHD][hapmap];0.90[TSI][hapmap];0.85[EUR][1000 genomes]
rs27712	0.81[CEU][hapmap];0.83[CHD][hapmap];0.90[TSI][hapmap];0.83[EUR][1000 genomes]
rs27747	0.84[CEU][hapmap]
rs27993	0.81[CEU][hapmap];0.85[CHD][hapmap];0.90[TSI][hapmap];0.85[EUR][1000 genomes]
rs27998	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2859491	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2910686	0.90[CEU][hapmap];0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2910687	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2910688	0.87[AFR][1000 genomes]
rs2910787	1.00[ASW][hapmap];0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];0.96[LWK][hapmap];0.91[MKK][hapmap];0.85[YRI][hapmap];0.98[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2910788	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2910789	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2910793	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2911134	0.84[JPT][hapmap]
rs2927608	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2927609	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs31398	0.83[ASN][1000 genomes]
rs33934033	0.83[AFR][1000 genomes]
rs3797796	0.84[CEU][hapmap];0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs38029	0.85[EUR][1000 genomes]
rs38030	0.82[ASN][1000 genomes]
rs38031	0.85[EUR][1000 genomes]
rs38032	0.89[EUR][1000 genomes]
rs38033	0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs38034	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.98[LWK][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs38035	0.84[CEU][hapmap]
rs38036	0.84[CEU][hapmap]
rs38038	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs38039	0.86[EUR][1000 genomes]
rs38040	1.00[ASW][hapmap];0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];0.93[LWK][hapmap];0.91[MKK][hapmap];0.88[ASN][1000 genomes]
rs38041	0.84[CEU][hapmap]
rs38043	0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs38044	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3849749	0.81[CEU][hapmap];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs3849750	0.80[CEU][hapmap]
rs3909451	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.98[LWK][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];0.85[YRI][hapmap];0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs39602	0.92[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs42983	0.81[ASN][1000 genomes]
rs4360063	0.92[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.88[YRI][hapmap];0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6859168	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6870825	0.95[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6871162	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.98[LWK][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];0.85[YRI][hapmap];0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6873866	0.84[AMR][1000 genomes]
rs6887500	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs716848	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7700332	0.80[CEU][hapmap]
rs7703341	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7705093	0.84[ASN][1000 genomes]
rs7713127	0.84[CEU][hapmap];0.82[EUR][1000 genomes]
rs7716222	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.98[LWK][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];0.85[YRI][hapmap];0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7719705	0.80[CEU][hapmap];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7726445	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7731592	0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.85[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7733312	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7736466	0.84[CEU][hapmap];0.82[EUR][1000 genomes]
rs9314181	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432755	chr5:95987984-96657483	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
2	nsv598962	chr5:96057891-96893164	Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
3	nsv948703	chr5:96078309-96368839	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
4	nsv1027472	chr5:96081592-96337550	Strong transcription Genic enhancers Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
5	nsv1028741	chr5:96082401-96372165	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
6	nsv949058	chr5:96082433-96390619	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
7	nsv598963	chr5:96084776-96363407	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
8	nsv531967	chr5:96127842-96302702	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases

mRNA abundance (count:19)

SNP	Gene	Cis/trans	Tissue	Source
rs2762	LRAP	Cis_1M	lymphoblastoid	RTeQTL
rs2762	LRAP	cis	normal skin	skin_eQTL
rs2762	LRAP	cis	lesional skin	skin_eQTL
rs2762	ERAP2	cis	Artery Aorta	GTEx
rs2762	ERAP2	cis	Esophagus Muscularis	GTEx
rs2762	ERAP2	cis	Nerve Tibial	GTEx
rs2762	ERAP2	cis	Esophagus Mucosa	GTEx
rs2762	ERAP2	cis	Thyroid	GTEx
rs2762	ERAP2	cis	Adipose Subcutaneous	GTEx
rs2762	ERAP2	cis	lung	GTEx
rs2762	ERAP2	cis	Whole Blood	GTEx
rs2762	ERAP2	cis	Heart Left Ventricle	GTEx
rs2762	LRAP	cis	uninvolved skin	skin_eQTL
rs2762	ERAP2	cis	Artery Tibial	GTEx
rs2762	LNPEP	cis	normal skin	skin_eQTL
rs2762	ERAP2	cis	Skin Sun Exposed Lower leg	GTEx
rs2762	ERAP2	cis	Stomach	GTEx
rs2762	ERAP2	cis	Muscle Skeletal	GTEx
rs2762	AC008865.1	cis	Artery Tibial	GTEx

Chromatin state (count:107 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:96268200-96274000	Active TSS	GM12878-XiMat	blood
2	chr5:96268400-96273400	Active TSS	Fetal Thymus	thymus
3	chr5:96268400-96273600	Active TSS	Thymus	Thymus
4	chr5:96269400-96273600	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
5	chr5:96269600-96273800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr5:96269800-96273600	Active TSS	Pancreatic Islets	Pancreatic Islet
7	chr5:96270200-96273400	Active TSS	Rectal Smooth Muscle	rectum
8	chr5:96271600-96273600	Active TSS	Primary T cells fromperipheralblood	blood
9	chr5:96271800-96273800	Flanking Active TSS	Primary B cells from cord blood	blood
10	chr5:96272000-96273400	Active TSS	Brain Germinal Matrix	brain
11	chr5:96272400-96273400	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
12	chr5:96272400-96273600	Flanking Active TSS	Primary hematopoietic stem cells	blood
13	chr5:96272400-96273800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr5:96272400-96273800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr5:96272600-96273400	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
16	chr5:96272600-96273400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
17	chr5:96272600-96273400	Flanking Active TSS	Adipose Nuclei	Adipose
18	chr5:96272600-96273400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
19	chr5:96272600-96273400	Flanking Active TSS	Osteobl	bone
20	chr5:96272600-96273600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
21	chr5:96272600-96273800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr5:96272600-96274600	Flanking Active TSS	Primary T cells from cord blood	blood
23	chr5:96272600-96274600	Flanking Active TSS	Dnd41	blood
24	chr5:96272600-96281400	Weak transcription	Spleen	Spleen
25	chr5:96272800-96273400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr5:96272800-96273400	Flanking Active TSS	HepG2	liver
27	chr5:96272800-96273600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr5:96272800-96273600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr5:96272800-96273600	Flanking Active TSS	Fetal Heart	heart
30	chr5:96272800-96273800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
31	chr5:96272800-96273800	Active TSS	Placenta	Placenta
32	chr5:96272800-96273800	Enhancers	Placenta Amnion	Placenta Amnion
33	chr5:96272800-96274000	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
34	chr5:96272800-96276400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
35	chr5:96272800-96279000	Weak transcription	Esophagus	oesophagus
36	chr5:96273000-96273400	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
37	chr5:96273000-96273400	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
38	chr5:96273000-96273400	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr5:96273000-96273400	Enhancers	Fetal Lung	lung
40	chr5:96273000-96273400	Active TSS	K562	blood
41	chr5:96273000-96273600	Enhancers	Primary B cells from peripheral blood	blood
42	chr5:96273000-96273600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
43	chr5:96273000-96273600	Active TSS	Skeletal Muscle Male	skeletal muscle
44	chr5:96273000-96273600	Flanking Active TSS	NHDF-Ad	bronchial
45	chr5:96273000-96273600	Flanking Active TSS	NHEK	skin
46	chr5:96273000-96273800	Enhancers	Cortex derived primary cultured neurospheres	brain
47	chr5:96273000-96273800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr5:96273000-96274000	Enhancers	Colon Smooth Muscle	Colon
49	chr5:96273000-96274000	Enhancers	HSMM	muscle
50	chr5:96273000-96274200	Weak transcription	Ovary	ovary

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