The 2.0 version of rSNPBase

Variant report

Variant rs1216569
Chromosome Location chr5:96262534-96262535
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:96218000-96264600 Weak transcription Right Ventricle heart
2 chr5:96221600-96269200 Weak transcription Fetal Brain Male brain
3 chr5:96222000-96268600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr5:96225600-96266400 Weak transcription Gastric stomach
5 chr5:96229600-96269600 Weak transcription Aorta Aorta
6 chr5:96229800-96270000 Weak transcription Esophagus oesophagus
7 chr5:96237400-96269200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr5:96237800-96265000 Weak transcription Fetal Muscle Leg muscle
9 chr5:96239800-96268000 Weak transcription Colonic Mucosa Colon
10 chr5:96242200-96268000 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr5:96243600-96266400 Weak transcription Brain Angular Gyrus brain
12 chr5:96245800-96264600 Weak transcription Left Ventricle heart
13 chr5:96246000-96268200 Weak transcription Fetal Intestine Small intestine
14 chr5:96246000-96270200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr5:96249600-96267800 Weak transcription Fetal Intestine Large intestine
16 chr5:96249800-96264600 Weak transcription Spleen Spleen
17 chr5:96249800-96270000 Weak transcription Lung lung
18 chr5:96253800-96265800 Weak transcription Thymus Thymus
19 chr5:96254000-96267200 Weak transcription Adipose Nuclei Adipose
20 chr5:96254000-96268600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr5:96254800-96262600 Weak transcription Primary monocytes fromperipheralblood blood
22 chr5:96256000-96266400 Weak transcription Duodenum Mucosa Duodenum
23 chr5:96256200-96264000 Weak transcription Dnd41 blood
24 chr5:96256200-96267000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr5:96256400-96266600 Weak transcription Primary B cells from cord blood blood
26 chr5:96257200-96265800 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr5:96257400-96269600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr5:96257800-96267400 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr5:96258400-96264200 Weak transcription Primary hematopoietic stem cells blood
30 chr5:96258600-96264000 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr5:96258800-96267600 Weak transcription Brain Substantia Nigra brain
32 chr5:96259800-96264600 Weak transcription Psoas Muscle Psoas
33 chr5:96259800-96267400 Weak transcription Brain Anterior Caudate brain
34 chr5:96260000-96264200 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr5:96260000-96264600 Weak transcription Pancreas Pancrea
36 chr5:96260000-96265800 Weak transcription Brain Cingulate Gyrus brain
37 chr5:96260000-96266400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr5:96260200-96263800 Weak transcription K562 blood
39 chr5:96260200-96264000 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr5:96260200-96264200 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr5:96260200-96267800 Weak transcription Brain Inferior Temporal Lobe brain
42 chr5:96260200-96268200 Weak transcription HMEC breast
43 chr5:96260200-96269000 Weak transcription Fetal Stomach stomach
44 chr5:96260200-96269400 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr5:96260400-96264000 Weak transcription Fetal Heart heart
46 chr5:96260400-96267400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr5:96260400-96267400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr5:96260400-96268200 Weak transcription NHEK skin
49 chr5:96260600-96268600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr5:96260800-96264600 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015