Variant report

Variant rs1423357
Chromosome Location chr5:96298758-96298759
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:96273000-96299200 Weak transcription Aorta Aorta
2 chr5:96277800-96303800 Weak transcription Pancreas Pancrea
3 chr5:96278200-96314400 Weak transcription Fetal Intestine Large intestine
4 chr5:96279800-96303800 Weak transcription Esophagus oesophagus
5 chr5:96282200-96303800 Weak transcription Spleen Spleen
6 chr5:96285400-96304400 Weak transcription Fetal Intestine Small intestine
7 chr5:96286400-96303800 Weak transcription Right Ventricle heart
8 chr5:96288400-96303800 Weak transcription Fetal Stomach stomach
9 chr5:96289000-96298800 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr5:96290000-96298800 Weak transcription Fetal Lung lung
11 chr5:96292800-96299400 Enhancers Primary neutrophils fromperipheralblood blood
12 chr5:96292800-96299800 Enhancers Primary monocytes fromperipheralblood blood
13 chr5:96293800-96299000 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr5:96294000-96303400 Weak transcription A549 lung
15 chr5:96294400-96299200 Weak transcription Liver Liver
16 chr5:96294600-96299000 Weak transcription Stomach Smooth Muscle stomach
17 chr5:96294600-96303600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr5:96295800-96302200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr5:96296000-96299400 Enhancers NHEK skin
20 chr5:96296200-96299600 Enhancers Osteobl bone
21 chr5:96296400-96299600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr5:96296600-96299400 Flanking Active TSS Primary T cells from cord blood blood
23 chr5:96296800-96299600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr5:96296800-96300000 Enhancers Brain Substantia Nigra brain
25 chr5:96297000-96299400 Enhancers Placenta Placenta
26 chr5:96297000-96300000 Enhancers Primary B cells from peripheral blood blood
27 chr5:96297200-96299400 Enhancers Primary T cells fromperipheralblood blood
28 chr5:96297200-96299400 Enhancers Primary Natural Killer cells fromperipheralblood blood
29 chr5:96297200-96299400 Enhancers Rectal Mucosa Donor 29 rectum
30 chr5:96297200-96299400 Flanking Active TSS Dnd41 blood
31 chr5:96297200-96299800 Enhancers Primary hematopoietic stem cells blood
32 chr5:96297200-96299800 Enhancers Adipose Nuclei Adipose
33 chr5:96297200-96299800 Enhancers Fetal Thymus thymus
34 chr5:96297400-96300200 Enhancers Primary B cells from cord blood blood
35 chr5:96297600-96299200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
36 chr5:96297600-96299400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr5:96297600-96299400 Enhancers HMEC breast
38 chr5:96297600-96299600 Enhancers Duodenum Mucosa Duodenum
39 chr5:96297600-96299800 Enhancers Skeletal Muscle Female skeletal muscle
40 chr5:96297600-96299800 Enhancers NHDF-Ad bronchial
41 chr5:96297800-96298800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr5:96297800-96298800 Transcr. at gene 5' and 3' GM12878-XiMat blood
43 chr5:96297800-96299000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
44 chr5:96297800-96299000 Enhancers Brain Inferior Temporal Lobe brain
45 chr5:96297800-96299000 Enhancers K562 blood
46 chr5:96297800-96299200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr5:96297800-96299200 Enhancers Psoas Muscle Psoas
48 chr5:96297800-96299200 Enhancers Stomach Mucosa stomach
49 chr5:96297800-96299400 Enhancers Breast Myoepithelial Primary Cells Breast
50 chr5:96297800-96299400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin

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