Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:91291214..91293702-chr10:91316948..91318606,2	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs12411564	0.95[ASN][1000 genomes]
rs12415606	0.95[ASN][1000 genomes]
rs12572076	0.95[ASN][1000 genomes]
rs12573641	0.93[ASN][1000 genomes]
rs12573820	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs17122257	1.00[AFR][1000 genomes]
rs3740030	1.00[AFR][1000 genomes]
rs56034228	1.00[AFR][1000 genomes]
rs56086829	1.00[AFR][1000 genomes]
rs56280029	1.00[AFR][1000 genomes]
rs56306937	1.00[AFR][1000 genomes]
rs56310228	1.00[AFR][1000 genomes]
rs56398433	1.00[AFR][1000 genomes]
rs56908797	1.00[AFR][1000 genomes]
rs57304744	1.00[AFR][1000 genomes]
rs72816713	1.00[AFR][1000 genomes]
rs72816714	1.00[AFR][1000 genomes]
rs72816718	1.00[AFR][1000 genomes]
rs72816720	1.00[AFR][1000 genomes]
rs72816749	1.00[AFR][1000 genomes]
rs72816756	1.00[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs72816757	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72816764	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs72816768	1.00[AFR][1000 genomes];0.80[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs72818735	1.00[AFR][1000 genomes]
rs73363844	0.95[ASN][1000 genomes]
rs7922914	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1042848	chr10:90466032-91318474	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
2	nsv540741	chr10:90466032-91318474	Enhancers Flanking Active TSS Weak transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
3	nsv1041964	chr10:90861380-91378356	Flanking Active TSS Enhancers Weak transcription Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:91279400-91294800	Weak transcription	HSMM	muscle
2	chr10:91283600-91294600	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr10:91290600-91294000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr10:91291200-91292800	Enhancers	HMEC	breast
5	chr10:91291400-91293600	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
6	chr10:91291600-91293000	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr10:91291600-91293200	Enhancers	NHEK	skin
8	chr10:91291800-91293800	Weak transcription	Pancreas	Pancrea
9	chr10:91292000-91292800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr10:91292000-91293200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr10:91292000-91293600	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr10:91292000-91293600	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
13	chr10:91292200-91292800	Enhancers	iPS-20b Cell Line	embryonic stem cell
14	chr10:91292400-91293000	Enhancers	Hela-S3	cervix
15	chr10:91292400-91293200	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet

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