Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10501158	1.00[CHB][hapmap];1.00[CHD][hapmap]
rs10501161	1.00[CHB][hapmap];1.00[CHD][hapmap]
rs11033734	1.00[CHB][hapmap]
rs12271660	1.00[CHB][hapmap];1.00[CHD][hapmap]
rs12417264	1.00[CHB][hapmap]
rs12421531	1.00[CHB][hapmap]
rs12422065	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1498339	1.00[CHB][hapmap]
rs1498340	1.00[CHB][hapmap]
rs16929016	1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16929073	1.00[ASN][1000 genomes]
rs16929126	1.00[CHD][hapmap]
rs16929141	1.00[CHB][hapmap];1.00[CHD][hapmap]
rs16929222	1.00[CHB][hapmap]
rs16929268	1.00[CHB][hapmap];1.00[CHD][hapmap]
rs1980131	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs2056094	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[ASN][1000 genomes]
rs2901704	1.00[CHB][hapmap]
rs4151000	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[ASN][1000 genomes]
rs4151040	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[ASN][1000 genomes]
rs4151045	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[ASN][1000 genomes]
rs5030488	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73453401	1.00[ASN][1000 genomes]
rs73455516	1.00[ASN][1000 genomes]
rs73455518	1.00[ASN][1000 genomes]
rs73455531	1.00[ASN][1000 genomes]
rs73455534	1.00[ASN][1000 genomes]
rs7938326	1.00[CHB][hapmap]
rs872053	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[ASN][1000 genomes]
rs9971465	1.00[CHB][hapmap]
rs9971578	1.00[CHB][hapmap];1.00[CHD][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467791	chr11:36108497-36999385	Flanking Active TSS Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
2	nsv554003	chr11:36108497-36999385	ZNF genes & repeats Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
3	esv2760215	chr11:36559278-36573022	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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