Variant report

Variant	rs12436525
Chromosome Location	chr14:84448559-84448560
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10484122	0.83[EUR][1000 genomes]
rs11159625	0.81[EUR][1000 genomes]
rs12433100	0.81[EUR][1000 genomes]
rs12433667	0.90[ASN][1000 genomes]
rs12434759	0.83[EUR][1000 genomes]
rs12435187	0.81[EUR][1000 genomes]
rs12435245	0.83[EUR][1000 genomes]
rs12437234	0.94[ASN][1000 genomes]
rs12586479	0.90[ASN][1000 genomes]
rs12587115	0.96[ASN][1000 genomes]
rs12587723	0.94[ASN][1000 genomes]
rs12588733	0.90[ASN][1000 genomes]
rs12588936	0.90[ASN][1000 genomes]
rs12589845	0.90[ASN][1000 genomes]
rs12590706	0.90[ASN][1000 genomes]
rs12897738	0.83[EUR][1000 genomes]
rs12898147	0.90[ASN][1000 genomes]
rs17119417	0.90[ASN][1000 genomes]
rs17119488	0.90[ASN][1000 genomes]
rs17119542	0.87[ASN][1000 genomes]
rs17647821	0.83[EUR][1000 genomes]
rs17654374	0.81[EUR][1000 genomes]
rs17726697	0.83[EUR][1000 genomes]
rs1986658	0.96[ASN][1000 genomes]
rs34708795	0.83[EUR][1000 genomes]
rs4904149	0.90[ASN][1000 genomes]
rs4904150	0.96[ASN][1000 genomes]
rs4904154	0.87[ASN][1000 genomes]
rs58445096	0.85[ASN][1000 genomes]
rs61985922	0.81[EUR][1000 genomes]
rs61985923	0.81[EUR][1000 genomes]
rs61987170	0.82[EUR][1000 genomes]
rs7157753	0.83[EUR][1000 genomes]
rs72701041	0.90[ASN][1000 genomes]
rs74069027	0.90[ASN][1000 genomes]
rs8003423	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039271	chr14:84405561-84467550	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a
2	nsv974291	chr14:84447572-84460362	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84448400-84448600	ZNF genes & repeats	Fetal Heart	heart

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links