Variant report

Variant	rs17119488
Chromosome Location	chr14:84495297-84495298
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:84489726..84491906-chr14:84495009..84496588,2	MCF-7	breast:
2	chr14:84493242..84495734-chr14:84508485..84511044,2	K562	blood:

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11159616	0.94[JPT][hapmap]
rs12433667	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12436525	0.90[ASN][1000 genomes]
rs12437234	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12586479	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12586849	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12587115	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12587723	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12588733	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12588936	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12589845	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12590706	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12898147	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17119417	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17119542	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17119558	0.87[ASN][1000 genomes]
rs1986658	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4904149	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4904150	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4904154	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58445096	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72701041	0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs74069027	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1382	chr14:84487547-84532237	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84492200-84495400	Weak transcription	Fetal Lung	lung
2	chr14:84494800-84496000	Weak transcription	Adipose Nuclei	Adipose
3	chr14:84494800-84496200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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