Variant report

Variant	rs4904154
Chromosome Location	chr14:84502703-84502704
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:84502277..84505270-chr14:84505499..84508331,2	MCF-7	breast:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs12433667	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12436525	0.87[ASN][1000 genomes]
rs12437234	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12586479	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12586849	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12587115	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12587723	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12588733	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12588936	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12589845	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12590706	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12898147	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17119417	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17119488	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17119542	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17119558	0.90[ASN][1000 genomes]
rs1986658	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4904149	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4904150	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58445096	0.98[ASN][1000 genomes]
rs72701041	0.96[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs74069027	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1382	chr14:84487547-84532237	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84502200-84504400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr14:84502400-84504200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
3	chr14:84502600-84503400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr14:84502600-84503600	Enhancers	Primary hematopoietic stem cells	blood
5	chr14:84502600-84504200	Enhancers	Primary hematopoietic stem cells short term culture	blood

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