Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs12507985	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12645896	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12646058	0.84[EUR][1000 genomes]
rs12646232	0.89[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs12648980	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs16897040	0.82[EUR][1000 genomes]
rs16897142	0.84[EUR][1000 genomes]
rs16897144	0.84[EUR][1000 genomes]
rs4521343	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs66763016	0.85[EUR][1000 genomes]
rs67249909	0.85[EUR][1000 genomes]
rs67996028	0.85[EUR][1000 genomes]
rs6812499	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6828694	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6838041	0.85[EUR][1000 genomes]
rs73232257	0.84[EUR][1000 genomes]
rs73248757	0.85[EUR][1000 genomes]
rs73248762	0.84[EUR][1000 genomes]
rs73248783	0.88[EUR][1000 genomes]
rs73250405	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73250408	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7668905	0.81[EUR][1000 genomes]
rs7671449	0.88[EUR][1000 genomes]
rs7674800	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1003931	chr4:18241575-18849898	Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv533087	chr4:18362040-19176896	Enhancers Bivalent Enhancer ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:18580800-18581600	Enhancers	Fetal Brain Male	brain
2	chr4:18581400-18581800	Enhancers	Pancreatic Islets	Pancreatic Islet

Quick Search: