Variant report

Variant rs12508626
Chromosome Location chr4:87514712-87514713
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:87512800-87514800 Weak transcription Pancreas Pancrea
2 chr4:87513000-87514800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr4:87513200-87514800 Weak transcription Lung lung
4 chr4:87513200-87518000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr4:87513200-87518600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr4:87513400-87514800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr4:87513400-87514800 Enhancers Brain Substantia Nigra brain
8 chr4:87513400-87515000 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
9 chr4:87513400-87517400 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
10 chr4:87513600-87514800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr4:87513600-87514800 Flanking Active TSS HMEC breast
12 chr4:87513600-87517400 Active TSS ES-WA7 Cell Line embryonic stem cell
13 chr4:87513600-87518000 Active TSS H1 Cell Line embryonic stem cell
14 chr4:87513600-87518400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr4:87513800-87514800 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
16 chr4:87513800-87514800 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr4:87513800-87514800 Enhancers Muscle Satellite Cultured Cells --
18 chr4:87513800-87515000 Flanking Active TSS Osteobl bone
19 chr4:87513800-87515200 Flanking Active TSS NH-A brain
20 chr4:87513800-87515600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr4:87513800-87517000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr4:87513800-87517800 Active TSS Brain Anterior Caudate brain
23 chr4:87513800-87518400 Active TSS ES-I3 Cell Line embryonic stem cell
24 chr4:87514000-87514800 Active TSS Rectal Mucosa Donor 29 rectum
25 chr4:87514000-87515000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr4:87514000-87515200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr4:87514000-87516200 Active TSS Fetal Brain Female brain
28 chr4:87514000-87517400 Active TSS A549 lung
29 chr4:87514000-87518600 Active TSS Fetal Kidney kidney
30 chr4:87514000-87519000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr4:87514200-87514800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr4:87514200-87514800 Weak transcription Placenta Amnion Placenta Amnion
33 chr4:87514200-87514800 Enhancers Rectal Mucosa Donor 31 rectum
34 chr4:87514200-87514800 Flanking Active TSS Stomach Smooth Muscle stomach
35 chr4:87514200-87515000 Active TSS Brain Germinal Matrix brain
36 chr4:87514200-87517200 Active TSS H9 Cell Line embryonic stem cell
37 chr4:87514200-87517400 Active TSS Pancreatic Islets Pancreatic Islet
38 chr4:87514200-87517800 Active TSS Brain Angular Gyrus brain
39 chr4:87514400-87514800 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr4:87514400-87514800 Enhancers Primary hematopoietic stem cells short term culture blood
41 chr4:87514400-87514800 Enhancers Fetal Adrenal Gland Adrenal Gland
42 chr4:87514400-87514800 Flanking Active TSS Fetal Lung lung
43 chr4:87514400-87515200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr4:87514400-87517000 Active TSS HUES48 Cell Line embryonic stem cell
45 chr4:87514400-87517400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
46 chr4:87514400-87517600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
47 chr4:87514400-87518400 Active TSS Right Atrium heart
48 chr4:87514600-87514800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr4:87514600-87514800 Enhancers Primary hematopoietic stem cells blood
50 chr4:87514600-87514800 Enhancers Primary T helper memory cells from peripheral blood 1 blood

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