The 2.0 version of rSNPBase

Variant report

Variant rs12510393
Chromosome Location chr4:87521441-87521442
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:87517000-87536600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr4:87517200-87529800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr4:87517600-87521600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr4:87518600-87526000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr4:87518800-87522000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
6 chr4:87519000-87523000 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr4:87519000-87523000 Weak transcription Brain Inferior Temporal Lobe brain
8 chr4:87519000-87524000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr4:87519000-87524200 Enhancers Primary T helper 17 cells PMA-I stimulated --
10 chr4:87519000-87525600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr4:87519000-87526000 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr4:87519000-87529200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr4:87519000-87530000 Weak transcription Osteobl bone
14 chr4:87519200-87521600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr4:87519200-87522800 Weak transcription Brain Substantia Nigra brain
16 chr4:87519200-87523000 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr4:87519200-87523000 Weak transcription HMEC breast
18 chr4:87519200-87525600 Enhancers NHEK skin
19 chr4:87519400-87529600 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr4:87519600-87526000 Weak transcription Fetal Lung lung
21 chr4:87519600-87529800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr4:87520000-87522800 Weak transcription Brain Cingulate Gyrus brain
23 chr4:87520200-87523000 Weak transcription Brain Hippocampus Middle brain
24 chr4:87520200-87524200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr4:87520200-87528600 Weak transcription Ovary ovary
26 chr4:87520800-87521800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr4:87520800-87522000 Enhancers HUES64 Cell Line embryonic stem cell
28 chr4:87521000-87521600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
29 chr4:87521000-87521600 Enhancers Brain Anterior Caudate brain
30 chr4:87521000-87521800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr4:87521200-87521800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr4:87521200-87521800 Enhancers Fetal Kidney kidney
33 chr4:87521200-87521800 Enhancers NHDF-Ad bronchial
34 chr4:87521400-87521800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr4:87521400-87526000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr4:87521400-87532800 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr4:87521400-87546800 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015