The 2.0 version of rSNPBase

Variant report

Variant rs1250878
Chromosome Location chr1:76196313-76196314
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:76190800-76199400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:76190800-76207200 Weak transcription Spleen Spleen
3 chr1:76190800-76208000 Weak transcription Gastric stomach
4 chr1:76191000-76199000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr1:76191200-76197600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr1:76191200-76219600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr1:76191400-76199200 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:76191400-76199400 Weak transcription Aorta Aorta
9 chr1:76191800-76208000 Weak transcription A549 lung
10 chr1:76191800-76208200 Weak transcription Brain Substantia Nigra brain
11 chr1:76191800-76209400 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr1:76192000-76196400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr1:76192000-76197400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:76192000-76198600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr1:76192000-76198600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:76192000-76198600 Weak transcription HSMMtube muscle
17 chr1:76192000-76199400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:76192000-76199400 Weak transcription Lung lung
19 chr1:76192000-76208000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:76192000-76210200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr1:76192000-76220400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:76192000-76220600 Weak transcription ES-WA7 Cell Line embryonic stem cell
23 chr1:76192000-76227800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr1:76192200-76198200 Weak transcription Fetal Intestine Large intestine
25 chr1:76192200-76198400 Weak transcription Primary T cells fromperipheralblood blood
26 chr1:76192200-76198800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:76192200-76199200 Weak transcription Brain Hippocampus Middle brain
28 chr1:76192200-76200000 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr1:76192200-76200200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr1:76192200-76200400 Weak transcription Placenta Placenta
31 chr1:76192200-76204600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:76192200-76217800 Weak transcription Fetal Brain Male brain
33 chr1:76192200-76222000 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr1:76192400-76197200 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr1:76192400-76197400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:76192400-76197400 Weak transcription Primary T cells from cord blood blood
37 chr1:76192400-76197400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:76192400-76197400 Weak transcription NHDF-Ad bronchial
39 chr1:76192400-76197600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr1:76192400-76197800 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr1:76192400-76197800 Weak transcription Osteobl bone
42 chr1:76192400-76198000 Weak transcription Primary neutrophils fromperipheralblood blood
43 chr1:76192400-76198200 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr1:76192400-76198200 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr1:76192400-76198400 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr1:76192400-76198400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr1:76192400-76198600 Weak transcription Brain Inferior Temporal Lobe brain
48 chr1:76192400-76198600 Weak transcription Fetal Lung lung
49 chr1:76192400-76198600 Weak transcription HSMM muscle
50 chr1:76192400-76198600 Weak transcription NH-A brain

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Last update: Aug 31, 2015