Variant report

Variant rs12520195
Chromosome Location chr5:60738574-60738575
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60719800-60745200 Weak transcription NHDF-Ad bronchial
2 chr5:60720600-60743200 Weak transcription HSMMtube muscle
3 chr5:60726800-60745600 Weak transcription Stomach Mucosa stomach
4 chr5:60728400-60745400 Weak transcription Ovary ovary
5 chr5:60732600-60743000 Weak transcription Aorta Aorta
6 chr5:60733000-60745600 Weak transcription Psoas Muscle Psoas
7 chr5:60733400-60745200 Weak transcription Pancreas Pancrea
8 chr5:60733400-60745400 Weak transcription Esophagus oesophagus
9 chr5:60733400-60746800 Weak transcription Left Ventricle heart
10 chr5:60734600-60745200 Weak transcription Osteobl bone
11 chr5:60734800-60740600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr5:60735200-60745400 Weak transcription Muscle Satellite Cultured Cells --
13 chr5:60736400-60739600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr5:60736400-60739600 ZNF genes & repeats Primary hematopoietic stem cells blood
15 chr5:60736600-60739600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr5:60737200-60738600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr5:60737400-60738600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
18 chr5:60737400-60739200 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr5:60737400-60739200 ZNF genes & repeats Duodenum Mucosa Duodenum
20 chr5:60737400-60739600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr5:60737400-60739600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr5:60737600-60738800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
23 chr5:60737600-60739600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
24 chr5:60737600-60745200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr5:60737800-60740600 Weak transcription A549 lung
26 chr5:60737800-60744600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr5:60737800-60745400 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr5:60737800-60745600 Weak transcription Fetal Stomach stomach
29 chr5:60737800-60757000 Weak transcription Gastric stomach
30 chr5:60738000-60738800 Weak transcription Fetal Lung lung
31 chr5:60738000-60739000 ZNF genes & repeats H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr5:60738400-60738600 Enhancers Colon Smooth Muscle Colon
33 chr5:60738400-60739400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
34 chr5:60738400-60739600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
35 chr5:60738400-60740800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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