The 2.0 version of rSNPBase

Variant report

Variant rs12532060
Chromosome Location chr7:65899480-65899481
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:65879000-65905600 Weak transcription Lung lung
2 chr7:65879000-65909000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr7:65879000-65922200 Weak transcription Small Intestine intestine
4 chr7:65879200-65902000 Weak transcription Brain Substantia Nigra brain
5 chr7:65879200-65904000 Weak transcription Fetal Lung lung
6 chr7:65879200-65907400 Weak transcription Esophagus oesophagus
7 chr7:65879200-65924600 Weak transcription Brain Anterior Caudate brain
8 chr7:65879200-65939800 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr7:65879200-65946000 Weak transcription NHEK skin
10 chr7:65879200-65957600 Weak transcription Psoas Muscle Psoas
11 chr7:65879400-65900600 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr7:65879400-65901000 Weak transcription Brain Angular Gyrus brain
13 chr7:65879400-65901200 Weak transcription Stomach Smooth Muscle stomach
14 chr7:65879400-65909200 Weak transcription Primary hematopoietic stem cells blood
15 chr7:65879400-65914200 Weak transcription Left Ventricle heart
16 chr7:65879400-65914200 Weak transcription GM12878-XiMat blood
17 chr7:65879400-65917200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr7:65879400-65921000 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr7:65879400-65921400 Weak transcription Fetal Kidney kidney
20 chr7:65879600-65900600 Weak transcription Brain Germinal Matrix brain
21 chr7:65879600-65907600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr7:65879600-65913600 Weak transcription Primary B cells from peripheral blood blood
23 chr7:65879600-65919000 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr7:65879600-65920400 Weak transcription Primary B cells from cord blood blood
25 chr7:65879800-65913600 Weak transcription Fetal Muscle Trunk muscle
26 chr7:65884000-65919600 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr7:65885000-65904200 Weak transcription K562 blood
28 chr7:65886000-65913600 Weak transcription Primary T cells fromperipheralblood blood
29 chr7:65886600-65920400 Weak transcription Right Ventricle heart
30 chr7:65887000-65924600 Weak transcription Brain Cingulate Gyrus brain
31 chr7:65887000-65924600 Weak transcription Brain Hippocampus Middle brain
32 chr7:65887200-65904600 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr7:65889200-65903000 Weak transcription Thymus Thymus
34 chr7:65889200-65939600 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr7:65889600-65913800 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr7:65890000-65928800 Weak transcription Adipose Nuclei Adipose
37 chr7:65890200-65907400 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr7:65890400-65916200 Weak transcription Fetal Thymus thymus
39 chr7:65891400-65902000 Weak transcription H9 Cell Line embryonic stem cell
40 chr7:65891600-65939000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr7:65892000-65931800 Weak transcription Ovary ovary
42 chr7:65893200-65913400 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr7:65894200-65899800 Weak transcription Spleen Spleen
44 chr7:65894200-65905400 Weak transcription Gastric stomach
45 chr7:65894200-65939200 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr7:65894600-65905200 Weak transcription Pancreas Pancrea
47 chr7:65894800-65914000 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr7:65895200-65899600 Weak transcription Primary T cells from cord blood blood
49 chr7:65895200-65902600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr7:65895200-65904000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015