The 2.0 version of rSNPBase

Variant report

Variant rs12532249
Chromosome Location chr7:65906889-65906890
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:65879000-65909000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr7:65879000-65922200 Weak transcription Small Intestine intestine
3 chr7:65879200-65907400 Weak transcription Esophagus oesophagus
4 chr7:65879200-65924600 Weak transcription Brain Anterior Caudate brain
5 chr7:65879200-65939800 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr7:65879200-65946000 Weak transcription NHEK skin
7 chr7:65879200-65957600 Weak transcription Psoas Muscle Psoas
8 chr7:65879400-65909200 Weak transcription Primary hematopoietic stem cells blood
9 chr7:65879400-65914200 Weak transcription Left Ventricle heart
10 chr7:65879400-65914200 Weak transcription GM12878-XiMat blood
11 chr7:65879400-65917200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr7:65879400-65921000 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr7:65879400-65921400 Weak transcription Fetal Kidney kidney
14 chr7:65879600-65907600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr7:65879600-65913600 Weak transcription Primary B cells from peripheral blood blood
16 chr7:65879600-65919000 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr7:65879600-65920400 Weak transcription Primary B cells from cord blood blood
18 chr7:65879800-65913600 Weak transcription Fetal Muscle Trunk muscle
19 chr7:65884000-65919600 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr7:65886000-65913600 Weak transcription Primary T cells fromperipheralblood blood
21 chr7:65886600-65920400 Weak transcription Right Ventricle heart
22 chr7:65887000-65924600 Weak transcription Brain Cingulate Gyrus brain
23 chr7:65887000-65924600 Weak transcription Brain Hippocampus Middle brain
24 chr7:65889200-65939600 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr7:65889600-65913800 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr7:65890000-65928800 Weak transcription Adipose Nuclei Adipose
27 chr7:65890200-65907400 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr7:65890400-65916200 Weak transcription Fetal Thymus thymus
29 chr7:65891600-65939000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr7:65892000-65931800 Weak transcription Ovary ovary
31 chr7:65893200-65913400 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr7:65894200-65939200 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr7:65894800-65914000 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr7:65895200-65913400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr7:65895400-65907400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr7:65897600-65913200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr7:65898200-65938200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr7:65900000-65907600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr7:65900200-65913600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr7:65900200-65913800 Weak transcription Fetal Stomach stomach
41 chr7:65900400-65911000 Weak transcription Fetal Muscle Leg muscle
42 chr7:65900800-65912200 Weak transcription Primary T cells from cord blood blood
43 chr7:65903000-65922000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr7:65904400-65907400 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr7:65904400-65909600 Weak transcription Placenta Placenta
46 chr7:65904400-65939000 Weak transcription Duodenum Mucosa Duodenum
47 chr7:65905000-65908600 Weak transcription HUVEC blood vessel
48 chr7:65905000-65909000 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr7:65905000-65913200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr7:65905400-65907400 Weak transcription K562 blood

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Last update: Aug 31, 2015