The 2.0 version of rSNPBase

Variant report

Variant rs62465402
Chromosome Location chr7:65948024-65948025
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:65879200-65957600 Weak transcription Psoas Muscle Psoas
2 chr7:65905600-65957600 Weak transcription Fetal Lung lung
3 chr7:65911400-65957800 Weak transcription Aorta Aorta
4 chr7:65915800-65954200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr7:65917000-65957800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr7:65925000-65948400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr7:65925000-65957200 Weak transcription Dnd41 blood
8 chr7:65925000-65957600 Weak transcription Left Ventricle heart
9 chr7:65925400-65955400 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr7:65925400-65957200 Weak transcription Primary hematopoietic stem cells blood
11 chr7:65927600-65950000 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr7:65927600-65957600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr7:65931200-65957600 Weak transcription Right Ventricle heart
14 chr7:65931400-65957800 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr7:65934600-65955200 Weak transcription HMEC breast
16 chr7:65935800-65957600 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr7:65937200-65957200 Weak transcription H9 Cell Line embryonic stem cell
18 chr7:65937200-65957200 Weak transcription Placenta Amnion Placenta Amnion
19 chr7:65937200-65957600 Weak transcription HSMMtube muscle
20 chr7:65937400-65957200 Weak transcription Right Atrium heart
21 chr7:65937600-65958000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr7:65937800-65956600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr7:65937800-65957600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr7:65937800-65957800 Weak transcription Fetal Kidney kidney
25 chr7:65937800-65957800 Weak transcription Small Intestine intestine
26 chr7:65938200-65950800 Weak transcription Fetal Brain Female brain
27 chr7:65938200-65957600 Weak transcription HSMM muscle
28 chr7:65938600-65948400 Weak transcription Osteobl bone
29 chr7:65938600-65948600 Strong transcription Liver Liver
30 chr7:65938600-65948800 Strong transcription Fetal Muscle Leg muscle
31 chr7:65938800-65948600 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr7:65938800-65957600 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr7:65939200-65957600 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr7:65939400-65957600 Weak transcription Brain Germinal Matrix brain
35 chr7:65939800-65948200 Strong transcription Primary B cells from peripheral blood blood
36 chr7:65940200-65957200 Weak transcription Brain Substantia Nigra brain
37 chr7:65940400-65957600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr7:65940600-65954800 Weak transcription HepG2 liver
39 chr7:65940600-65957400 Weak transcription Pancreas Pancrea
40 chr7:65940600-65957600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr7:65940800-65957200 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr7:65940800-65957600 Weak transcription Brain Hippocampus Middle brain
43 chr7:65940800-65957600 Weak transcription Stomach Smooth Muscle stomach
44 chr7:65941000-65957200 Weak transcription Gastric stomach
45 chr7:65941000-65957400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr7:65941000-65957600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr7:65941000-65957600 Weak transcription Spleen Spleen
48 chr7:65941400-65957600 Weak transcription Colon Smooth Muscle Colon
49 chr7:65941600-65957600 Weak transcription Duodenum Mucosa Duodenum
50 chr7:65942200-65948600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015