Variant report

Variant	rs62467768
Chromosome Location	chr7:66040744-66040745
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:66039081..66041475-chr7:66044716..66046904,2	K562	blood:

Extended variants
information (count: 263 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:254)

rs_ID	r²[population]
rs10499785	0.90[EUR][1000 genomes]
rs12530546	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12530746	0.95[EUR][1000 genomes]
rs12530947	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12531374	0.90[EUR][1000 genomes]
rs12531402	0.90[EUR][1000 genomes]
rs12531690	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12531758	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12532060	0.92[EUR][1000 genomes]
rs12532147	0.90[EUR][1000 genomes]
rs12532173	0.95[EUR][1000 genomes]
rs12532182	0.95[EUR][1000 genomes]
rs12532247	0.95[EUR][1000 genomes]
rs12532249	0.95[EUR][1000 genomes]
rs12532267	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12532278	0.95[EUR][1000 genomes]
rs12532383	0.95[EUR][1000 genomes]
rs12532657	0.92[EUR][1000 genomes]
rs12533018	0.90[EUR][1000 genomes]
rs12533387	0.95[EUR][1000 genomes]
rs12533744	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12533877	0.95[EUR][1000 genomes]
rs12533886	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12533963	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12534039	0.92[EUR][1000 genomes]
rs12534192	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12534249	0.95[EUR][1000 genomes]
rs12534263	0.92[EUR][1000 genomes]
rs12534355	0.93[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12534391	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12534435	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12534985	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12535321	0.90[EUR][1000 genomes]
rs12535363	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12535756	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12535766	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12536586	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12536818	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12537037	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12537039	0.95[EUR][1000 genomes]
rs12537346	0.90[EUR][1000 genomes]
rs12537368	0.95[EUR][1000 genomes]
rs12537403	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12537545	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12537698	0.95[EUR][1000 genomes]
rs12537771	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12538011	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12538113	0.95[EUR][1000 genomes]
rs12538686	0.87[EUR][1000 genomes]
rs12539116	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12539191	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12539522	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12539696	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12539749	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12539795	0.95[EUR][1000 genomes]
rs12539848	0.90[EUR][1000 genomes]
rs12540455	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12540536	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12540667	0.92[EUR][1000 genomes]
rs1363056	0.95[EUR][1000 genomes]
rs17228285	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17228728	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17229513	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17229674	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17230057	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17294397	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2075004	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2279934	0.90[EUR][1000 genomes]
rs2279935	0.85[EUR][1000 genomes]
rs2286682	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2286685	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2286686	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28431850	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35910256	0.95[EUR][1000 genomes]
rs3735145	0.95[EUR][1000 genomes]
rs3735146	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs3735150	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3735152	0.90[EUR][1000 genomes]
rs3757420	0.90[EUR][1000 genomes]
rs3778906	0.90[EUR][1000 genomes]
rs3800811	0.87[EUR][1000 genomes]
rs3800813	0.90[EUR][1000 genomes]
rs3814466	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3815684	0.95[EUR][1000 genomes]
rs3823608	0.90[EUR][1000 genomes]
rs4078168	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4149467	0.95[EUR][1000 genomes]
rs4276561	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4717291	0.95[EUR][1000 genomes]
rs4717301	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4717305	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4717309	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4717311	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4717312	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4717313	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4717314	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4717316	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4717318	0.85[EUR][1000 genomes]
rs4718342	0.95[EUR][1000 genomes]
rs4718345	0.95[EUR][1000 genomes]
rs4718347	0.85[EUR][1000 genomes]
rs4718350	0.95[EUR][1000 genomes]
rs4718353	0.92[EUR][1000 genomes]
rs4718354	0.95[EUR][1000 genomes]
rs4718368	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4718372	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4718376	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4718379	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4718380	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4718381	0.90[EUR][1000 genomes]
rs4718382	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4718390	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4718391	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4718392	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4718393	0.90[EUR][1000 genomes]
rs4718394	0.80[EUR][1000 genomes]
rs4718395	0.90[EUR][1000 genomes]
rs4718396	0.90[EUR][1000 genomes]
rs4718397	0.90[EUR][1000 genomes]
rs4718398	0.85[EUR][1000 genomes]
rs4718402	0.90[EUR][1000 genomes]
rs62464646	0.90[EUR][1000 genomes]
rs62464647	0.90[EUR][1000 genomes]
rs62464648	0.90[EUR][1000 genomes]
rs62465362	0.95[EUR][1000 genomes]
rs62465363	0.90[EUR][1000 genomes]
rs62465364	0.92[EUR][1000 genomes]
rs62465365	0.90[EUR][1000 genomes]
rs62465367	0.92[EUR][1000 genomes]
rs62465372	0.95[EUR][1000 genomes]
rs62465373	0.95[EUR][1000 genomes]
rs62465376	0.92[EUR][1000 genomes]
rs62465377	0.92[EUR][1000 genomes]
rs62465380	0.95[EUR][1000 genomes]
rs62465389	0.95[EUR][1000 genomes]
rs62465390	0.92[EUR][1000 genomes]
rs62465391	0.90[EUR][1000 genomes]
rs62465392	0.95[EUR][1000 genomes]
rs62465394	0.95[EUR][1000 genomes]
rs62465395	0.95[EUR][1000 genomes]
rs62465396	0.95[EUR][1000 genomes]
rs62465397	0.95[EUR][1000 genomes]
rs62465399	0.88[EUR][1000 genomes]
rs62465400	0.95[EUR][1000 genomes]
rs62465401	0.95[EUR][1000 genomes]
rs62465402	0.92[EUR][1000 genomes]
rs62465403	0.90[EUR][1000 genomes]
rs62465404	0.95[EUR][1000 genomes]
rs62465405	0.87[EUR][1000 genomes]
rs62465422	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62465424	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62465425	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62465426	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62465428	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62465429	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62465431	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62465432	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62465433	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62465436	0.84[ASN][1000 genomes]
rs62465457	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62465458	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62466081	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62466083	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62466084	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62466085	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62466086	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62466087	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62466090	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62466091	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62466122	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62466123	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62466125	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62466126	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62466127	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62466128	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62466133	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62466134	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62466136	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62466137	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs62466138	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62466139	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62466140	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62466141	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs62466142	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62466143	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62466144	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62466145	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62466146	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62466147	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62466148	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62466787	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62466788	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62466789	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62466792	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62466795	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62466797	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62466798	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62466799	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs62466801	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62466802	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62466803	0.90[EUR][1000 genomes]
rs62466805	0.85[EUR][1000 genomes]
rs62466806	0.90[EUR][1000 genomes]
rs62466808	0.90[EUR][1000 genomes]
rs62466847	0.90[EUR][1000 genomes]
rs62466848	0.90[EUR][1000 genomes]
rs62466850	0.87[EUR][1000 genomes]
rs62466851	0.90[EUR][1000 genomes]
rs62466852	0.90[EUR][1000 genomes]
rs62466855	0.90[EUR][1000 genomes]
rs62466856	0.90[EUR][1000 genomes]
rs62466857	0.90[EUR][1000 genomes]
rs62466858	0.90[EUR][1000 genomes]
rs62466859	0.90[EUR][1000 genomes]
rs62467760	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62467762	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62467763	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62467764	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62467765	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62467766	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62467767	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62467769	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62467770	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62467771	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62467801	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62467802	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62467804	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62467805	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62467811	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62467814	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62467816	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs62467856	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62468260	0.90[EUR][1000 genomes]
rs62468261	0.90[EUR][1000 genomes]
rs62468262	0.90[EUR][1000 genomes]
rs62468263	0.90[EUR][1000 genomes]
rs62468705	0.95[EUR][1000 genomes]
rs62468707	0.92[EUR][1000 genomes]
rs62468708	0.92[EUR][1000 genomes]
rs62468709	0.87[EUR][1000 genomes]
rs62468711	0.95[EUR][1000 genomes]
rs62468712	0.90[EUR][1000 genomes]
rs62469060	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62469061	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62469062	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62469064	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62469066	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62469067	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62469069	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs62469070	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62469072	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7384751	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9801144	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9801269	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532124	chr7:65371521-66234730	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	125 gene(s)	inside rSNPs	diseases
2	nsv1026559	chr7:65617368-66370805	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	116 gene(s)	inside rSNPs	diseases
3	nsv1035107	chr7:65814901-66114919	Genic enhancers Strong transcription ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
4	nsv538909	chr7:65814901-66114919	Strong transcription Weak transcription Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
5	nsv888326	chr7:65825257-66066999	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
6	nsv482441	chr7:65885824-66061788	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
7	esv3377926	chr7:65934493-66051484	Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
8	esv3423847	chr7:65941210-66054107	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
9	nsv970868	chr7:66035219-66056610	Weak transcription Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs62467768	RABGEF1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:66004400-66052600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr7:66008600-66056000	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr7:66011600-66045000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr7:66021800-66056400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr7:66023000-66040800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
6	chr7:66023000-66041800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
7	chr7:66023200-66043800	Weak transcription	Fetal Heart	heart
8	chr7:66023200-66044400	Weak transcription	Right Atrium	heart
9	chr7:66023200-66048400	Weak transcription	Colon Smooth Muscle	Colon
10	chr7:66023200-66049800	Weak transcription	Stomach Mucosa	stomach
11	chr7:66023200-66055400	Weak transcription	Fetal Brain Male	brain
12	chr7:66023600-66042200	Strong transcription	Monocytes-CD14+_RO01746	blood
13	chr7:66024000-66046400	Weak transcription	NHLF	lung
14	chr7:66024200-66051200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr7:66024200-66055400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
16	chr7:66024200-66055600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr7:66024400-66051600	Weak transcription	Spleen	Spleen
18	chr7:66027600-66042400	Strong transcription	Primary monocytes fromperipheralblood	blood
19	chr7:66028600-66042000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr7:66028800-66042000	Strong transcription	HUES6 Cell Line	embryonic stem cell
21	chr7:66028800-66042000	Strong transcription	Primary B cells from peripheral blood	blood
22	chr7:66029000-66041400	Strong transcription	Primary T helper cells PMA-I stimulated	--
23	chr7:66029000-66042000	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr7:66029000-66042800	Strong transcription	Dnd41	blood
25	chr7:66029400-66046200	Weak transcription	Pancreas	Pancrea
26	chr7:66030600-66042600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
27	chr7:66031000-66041800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr7:66031400-66042000	Strong transcription	HUES48 Cell Line	embryonic stem cell
29	chr7:66031600-66045200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
30	chr7:66032400-66041600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
31	chr7:66032600-66041600	Strong transcription	Primary neutrophils fromperipheralblood	blood
32	chr7:66033000-66043400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr7:66033200-66042000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
34	chr7:66033600-66042000	Strong transcription	Fetal Intestine Large	intestine
35	chr7:66033600-66042200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
36	chr7:66033800-66041800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
37	chr7:66033800-66041800	Strong transcription	Adipose Nuclei	Adipose
38	chr7:66034200-66042000	Strong transcription	Fetal Muscle Trunk	muscle
39	chr7:66034800-66046400	Weak transcription	A549	lung
40	chr7:66035000-66041400	Strong transcription	Primary T cells fromperipheralblood	blood
41	chr7:66035400-66042000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
42	chr7:66035600-66041000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr7:66035800-66041800	Strong transcription	Fetal Muscle Leg	muscle
44	chr7:66036000-66041600	Strong transcription	Primary T cells from cord blood	blood
45	chr7:66036000-66041600	Strong transcription	HMEC	breast
46	chr7:66036000-66041800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
47	chr7:66036000-66041800	Strong transcription	GM12878-XiMat	blood
48	chr7:66036000-66042000	Strong transcription	Sigmoid Colon	Sigmoid Colon
49	chr7:66036000-66042000	Strong transcription	Osteobl	bone
50	chr7:66036400-66042400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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