Variant report

Variant	rs12531690
Chromosome Location	chr7:66147868-66147869
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:66145930..66148922-chr7:66213233..66215140,2	MCF-7	breast:
2	chr7:66147345..66148941-chr7:66150960..66153085,3	K562	blood:
3	chr7:66145800..66148420-chr7:66309175..66311369,3	MCF-7	breast:
4	chr1:180123619..180124402-chr7:66147119..66147881,2	NB4	blood:
5	chr7:66144717..66148625-chr7:66203954..66207507,5	K562	blood:
6	chr7:66145819..66148736-chr7:66203770..66205462,3	MCF-7	breast:
7	chr7:66119490..66121348-chr7:66145844..66148158,2	K562	blood:
8	chr7:66144687..66148625-chr7:66203954..66207507,6	K562	blood:

No data

Variant related genes	Relation type
ENSG00000154710	Chromatin interaction
ENSG00000226824	Chromatin interaction
ENSG00000230583	Chromatin interaction
ENSG00000116260	Chromatin interaction
ENSG00000272831	Chromatin interaction
ENSG00000271064	Chromatin interaction
ENSG00000243335	Chromatin interaction

Extended variants
information (count: 268 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:263)

rs_ID	r²[population]
rs10499785	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12530546	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12530947	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12531374	0.92[EUR][1000 genomes]
rs12531377	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12531402	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12531758	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12532147	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12532173	0.97[EUR][1000 genomes]
rs12532182	0.97[EUR][1000 genomes]
rs12532267	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12532888	0.84[ASN][1000 genomes]
rs12533018	0.92[EUR][1000 genomes]
rs12533744	0.87[EUR][1000 genomes]
rs12533877	0.97[EUR][1000 genomes]
rs12533886	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12533958	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12533963	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12534192	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12534263	0.95[EUR][1000 genomes]
rs12534355	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12534391	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12534435	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12534985	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12535268	0.87[EUR][1000 genomes]
rs12535321	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12535363	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12535756	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12535766	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12536130	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12536586	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12536818	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12537037	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12537346	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12537403	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12537545	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12537771	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12538011	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12538113	0.97[EUR][1000 genomes]
rs12538126	0.87[EUR][1000 genomes]
rs12538131	0.82[EUR][1000 genomes]
rs12538686	0.90[EUR][1000 genomes]
rs12539116	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12539191	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12539522	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12539696	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12539749	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12539795	0.97[EUR][1000 genomes]
rs12539848	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12540312	0.87[EUR][1000 genomes]
rs12540447	0.87[EUR][1000 genomes]
rs12540455	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12540536	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17228285	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17228728	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17229513	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17229674	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17230057	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17294397	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2075004	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2279934	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2279935	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2286682	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2286685	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2286686	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28431850	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35279320	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3735146	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3735150	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3735152	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3735153	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3757420	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3778906	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3778911	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3800811	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3800813	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3814466	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3823608	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4078168	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4276561	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4717301	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4717305	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4717309	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4717311	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4717312	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4717313	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4717314	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4717316	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4717318	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4717320	0.92[EUR][1000 genomes]
rs4717323	0.90[EUR][1000 genomes]
rs4717324	0.90[EUR][1000 genomes]
rs4717329	0.82[EUR][1000 genomes]
rs4718353	0.95[EUR][1000 genomes]
rs4718354	0.97[EUR][1000 genomes]
rs4718368	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4718372	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4718376	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4718379	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4718380	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4718381	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4718382	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4718390	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4718391	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4718392	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4718393	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4718394	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4718395	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4718396	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4718397	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4718398	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4718402	0.92[EUR][1000 genomes]
rs4718407	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4718409	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62464646	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62464647	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62464648	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62464651	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62464652	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62464653	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62464654	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62464655	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62464658	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62464659	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62465399	0.90[EUR][1000 genomes]
rs62465400	0.97[EUR][1000 genomes]
rs62465401	0.97[EUR][1000 genomes]
rs62465402	0.95[EUR][1000 genomes]
rs62465403	0.92[EUR][1000 genomes]
rs62465404	0.97[EUR][1000 genomes]
rs62465405	0.90[EUR][1000 genomes]
rs62465422	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62465424	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62465425	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62465426	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62465428	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62465429	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62465431	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62465432	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62465433	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62465436	0.82[EUR][1000 genomes]
rs62465457	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62465458	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs62465661	0.90[EUR][1000 genomes]
rs62465676	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62465678	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62465681	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62465682	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62465688	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62465698	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62465700	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62465701	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62465705	0.90[EUR][1000 genomes]
rs62465706	0.92[EUR][1000 genomes]
rs62465707	0.92[EUR][1000 genomes]
rs62465709	0.92[EUR][1000 genomes]
rs62465710	0.87[EUR][1000 genomes]
rs62465712	0.87[EUR][1000 genomes]
rs62465713	0.87[EUR][1000 genomes]
rs62465714	0.87[EUR][1000 genomes]
rs62465716	0.87[EUR][1000 genomes]
rs62465730	0.87[EUR][1000 genomes]
rs62465734	0.87[EUR][1000 genomes]
rs62465736	0.82[EUR][1000 genomes]
rs62465738	0.82[EUR][1000 genomes]
rs62465739	0.82[EUR][1000 genomes]
rs62465740	0.82[EUR][1000 genomes]
rs62465741	0.82[EUR][1000 genomes]
rs62465742	0.82[EUR][1000 genomes]
rs62465743	0.82[EUR][1000 genomes]
rs62465744	0.82[EUR][1000 genomes]
rs62465745	0.82[EUR][1000 genomes]
rs62466081	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466083	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466084	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466085	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466086	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466087	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466090	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466091	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466122	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62466123	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62466125	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62466126	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62466127	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62466128	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62466133	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62466134	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62466136	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62466137	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62466138	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62466139	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62466140	0.93[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62466141	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466142	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466143	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466144	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466145	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466146	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466147	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466148	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466787	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466788	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62466789	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466792	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466795	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62466797	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466798	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466799	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466801	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466802	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466803	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466805	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466806	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466808	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62466847	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466848	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466849	0.90[ASN][1000 genomes]
rs62466850	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466851	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466852	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466855	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466856	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62466857	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466858	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62466859	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62467760	0.95[EUR][1000 genomes]
rs62467762	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62467763	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62467764	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62467765	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62467766	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62467767	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs62467768	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62467769	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62467770	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62467771	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62467801	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62467802	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62467804	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62467805	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62467811	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62467814	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62467816	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62467856	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62468260	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62468261	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62468262	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62468263	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62469060	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62469061	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62469062	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62469064	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62469066	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62469067	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62469069	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62469070	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62469072	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7384751	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7781008	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7782418	0.83[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs9801144	1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9801269	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532124	chr7:65371521-66234730	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	125 gene(s)	inside rSNPs	diseases
2	nsv1026559	chr7:65617368-66370805	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	116 gene(s)	inside rSNPs	diseases
3	nsv981398	chr7:66138644-66147890	Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
4	esv3385090	chr7:66146376-66205022	Weak transcription Strong transcription Active TSS Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
5	esv3401338	chr7:66147493-66206298	Weak transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs12531690	RABGEF1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:66146000-66148200	Active TSS	iPS-15b Cell Line	embryonic stem cell
2	chr7:66146000-66148400	Active TSS	HUES6 Cell Line	embryonic stem cell
3	chr7:66146000-66148400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr7:66146000-66148400	Active TSS	Pancreatic Islets	Pancreatic Islet
5	chr7:66146000-66148800	Active TSS	Breast Myoepithelial Primary Cells	Breast
6	chr7:66146000-66149200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr7:66146200-66148000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr7:66146200-66148000	Flanking Active TSS	Primary hematopoietic stem cells	blood
9	chr7:66146200-66148200	Active TSS	H1 Cell Line	embryonic stem cell
10	chr7:66146200-66148200	Active TSS	Psoas Muscle	Psoas
11	chr7:66146200-66148400	Active TSS	HUES48 Cell Line	embryonic stem cell
12	chr7:66146200-66148600	Active TSS	Rectal Smooth Muscle	rectum
13	chr7:66146200-66148600	Active TSS	GM12878-XiMat	blood
14	chr7:66146200-66149000	Active TSS	HSMM	muscle
15	chr7:66146400-66148000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr7:66146400-66148000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr7:66146400-66148000	Active TSS	iPS-20b Cell Line	embryonic stem cell
18	chr7:66146400-66148000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr7:66146400-66148000	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
20	chr7:66146400-66148000	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
21	chr7:66146400-66148000	Active TSS	Aorta	Aorta
22	chr7:66146400-66148000	Active TSS	Brain Substantia Nigra	brain
23	chr7:66146400-66148000	Active TSS	Left Ventricle	heart
24	chr7:66146400-66148200	Active TSS	H9 Cell Line	embryonic stem cell
25	chr7:66146400-66148200	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr7:66146400-66148200	Active TSS	Fetal Kidney	kidney
27	chr7:66146400-66148200	Active TSS	Gastric	stomach
28	chr7:66146400-66148200	Active TSS	Ovary	ovary
29	chr7:66146400-66148200	Active TSS	A549	lung
30	chr7:66146400-66148400	Active TSS	Brain Inferior Temporal Lobe	brain
31	chr7:66146400-66148400	Active TSS	Esophagus	oesophagus
32	chr7:66146400-66148600	Active TSS	Duodenum Smooth Muscle	Duodenum
33	chr7:66146400-66148600	Active TSS	HSMMtube	muscle
34	chr7:66146400-66148800	Active TSS	Muscle Satellite Cultured Cells	--
35	chr7:66146400-66149000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr7:66146400-66149000	Active TSS	NHDF-Ad	bronchial
37	chr7:66146400-66149000	Active TSS	NHLF	lung
38	chr7:66146400-66149400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
39	chr7:66146600-66148000	Active TSS	Primary T cells from cord blood	blood
40	chr7:66146600-66148000	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr7:66146600-66148000	Active TSS	Brain Cingulate Gyrus	brain
42	chr7:66146600-66148000	Active TSS	Brain Hippocampus Middle	brain
43	chr7:66146600-66148000	Active TSS	Fetal Lung	lung
44	chr7:66146600-66148000	Active TSS	Placenta Amnion	Placenta Amnion
45	chr7:66146600-66148000	Active TSS	Sigmoid Colon	Sigmoid Colon
46	chr7:66146600-66148000	Active TSS	Hela-S3	cervix
47	chr7:66146600-66148000	Active TSS	NHEK	skin
48	chr7:66146600-66148200	Active TSS	Brain Anterior Caudate	brain
49	chr7:66146600-66148200	Active TSS	Colonic Mucosa	Colon
50	chr7:66146600-66148200	Active TSS	Colon Smooth Muscle	Colon

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