The 2.0 version of rSNPBase

Variant report

Variant rs12549683
Chromosome Location chr8:124798276-124798277
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:124781800-124811200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr8:124782200-124807800 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr8:124783600-124808000 Weak transcription Fetal Heart heart
4 chr8:124785400-124815000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr8:124785600-124815000 Strong transcription Duodenum Mucosa Duodenum
6 chr8:124785800-124829000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr8:124786000-124825200 Strong transcription Fetal Thymus thymus
8 chr8:124786200-124803000 Strong transcription HMEC breast
9 chr8:124786200-124814400 Strong transcription HSMM muscle
10 chr8:124786200-124815200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr8:124786200-124815400 Strong transcription Dnd41 blood
12 chr8:124786200-124825200 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr8:124786400-124805400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr8:124786400-124813800 Strong transcription HUES48 Cell Line embryonic stem cell
15 chr8:124786400-124815000 Strong transcription HUES6 Cell Line embryonic stem cell
16 chr8:124786400-124815200 Strong transcription Rectal Mucosa Donor 29 rectum
17 chr8:124786400-124827200 Strong transcription Primary T regulatory cells fromperipheralblood blood
18 chr8:124786800-124801200 Strong transcription HepG2 liver
19 chr8:124786800-124814600 Strong transcription Placenta Placenta
20 chr8:124787000-124813800 Strong transcription iPS-20b Cell Line embryonic stem cell
21 chr8:124787000-124816400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr8:124787000-124822800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr8:124787000-124827000 Strong transcription Primary T helper cells fromperipheralblood blood
24 chr8:124787400-124814400 Strong transcription A549 lung
25 chr8:124787600-124818800 Strong transcription Liver Liver
26 chr8:124789000-124802000 Strong transcription Primary T killer naive cells fromperipheralblood blood
27 chr8:124789200-124824600 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr8:124789400-124814800 Strong transcription Primary T cells fromperipheralblood blood
29 chr8:124789400-124821600 Weak transcription Stomach Mucosa stomach
30 chr8:124789400-124825200 Strong transcription Rectal Mucosa Donor 31 rectum
31 chr8:124789600-124811400 Strong transcription Fetal Lung lung
32 chr8:124789800-124801600 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr8:124789800-124827400 Strong transcription Primary T helper cells PMA-I stimulated --
34 chr8:124790000-124804000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr8:124790000-124827800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr8:124790200-124828600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr8:124790400-124807000 Strong transcription NHDF-Ad bronchial
38 chr8:124790600-124814800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr8:124790800-124800800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr8:124790800-124804200 Strong transcription Skeletal Muscle Female skeletal muscle
41 chr8:124790800-124806800 Strong transcription NH-A brain
42 chr8:124790800-124813400 Strong transcription HUVEC blood vessel
43 chr8:124790800-124814400 Strong transcription Osteobl bone
44 chr8:124790800-124815800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr8:124790800-124825200 Strong transcription Primary hematopoietic stem cells short term culture blood
46 chr8:124791000-124802000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
47 chr8:124791000-124804400 Strong transcription Colon Smooth Muscle Colon
48 chr8:124791000-124805800 Strong transcription iPS-18 Cell Line embryonic stem cell
49 chr8:124791000-124828600 Strong transcription Primary B cells from cord blood blood
50 chr8:124791000-124828600 Strong transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015