Variant report
| Variant | rs12565489 |
|---|---|
| Chromosome Location | chr1:179570589-179570590 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:3 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000261060 | Chromatin interaction |
| ENSG00000162782 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:17)
| rs_ID | r2[population] |
|---|---|
| rs10798697 | 1.00[ASN][1000 genomes] |
| rs10913830 | 1.00[ASN][1000 genomes] |
| rs11805051 | 1.00[ASN][1000 genomes] |
| rs12032339 | 0.88[AFR][1000 genomes];0.83[ASN][1000 genomes] |
| rs12047528 | 0.96[ASN][1000 genomes] |
| rs12121642 | 0.91[ASN][1000 genomes] |
| rs4133262 | 0.96[ASN][1000 genomes] |
| rs4604656 | 0.90[ASN][1000 genomes] |
| rs6677468 | 0.83[ASN][1000 genomes] |
| rs6677476 | 0.87[ASN][1000 genomes] |
| rs72706715 | 1.00[ASN][1000 genomes] |
| rs72706717 | 1.00[ASN][1000 genomes] |
| rs72706762 | 0.88[AFR][1000 genomes];0.83[ASN][1000 genomes] |
| rs72706766 | 0.88[AFR][1000 genomes];0.83[ASN][1000 genomes] |
| rs72706786 | 0.88[AFR][1000 genomes];0.83[ASN][1000 genomes] |
| rs7549026 | 0.91[ASN][1000 genomes] |
| rs8179491 | 0.83[ASN][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
