Variant report
| Variant | rs8179491 |
|---|---|
| Chromosome Location | chr1:179673475-179673476 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
1
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:35)
| rs_ID | r2[population] |
|---|---|
| rs10798697 | 0.83[ASN][1000 genomes] |
| rs10798707 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs10913830 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes] |
| rs10913831 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs10913834 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs10913835 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs10913836 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs10913837 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs10913838 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs10913839 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs10913851 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs11804670 | 1.00[JPT][hapmap] |
| rs11805051 | 0.83[ASN][1000 genomes] |
| rs12025031 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12030594 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12032339 | 1.00[ASN][1000 genomes] |
| rs12038691 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12041396 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12041941 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12042195 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12044010 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12047528 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes] |
| rs12565481 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12565489 | 0.83[ASN][1000 genomes] |
| rs12566427 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12566750 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs4133262 | 0.87[ASN][1000 genomes] |
| rs6704505 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs72706715 | 0.83[ASN][1000 genomes] |
| rs72706717 | 0.83[ASN][1000 genomes] |
| rs72706762 | 1.00[ASN][1000 genomes] |
| rs72706766 | 1.00[ASN][1000 genomes] |
| rs72706786 | 1.00[ASN][1000 genomes] |
| rs74132227 | 0.86[AFR][1000 genomes] |
| rs7549026 | 1.00[CHB][hapmap] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:179670000-179674200 | Enhancers | Stomach Mucosa | stomach |
| 2 | chr1:179673400-179674400 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
