Variant report

Variant rs12593979
Chromosome Location chr15:51741579-51741580
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:51734600-51748800 Weak transcription Fetal Intestine Small intestine
2 chr15:51735200-51742000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr15:51735800-51742000 Weak transcription Fetal Kidney kidney
4 chr15:51736800-51751200 Weak transcription HUVEC blood vessel
5 chr15:51737000-51775600 Strong transcription Primary monocytes fromperipheralblood blood
6 chr15:51737000-51776400 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr15:51737200-51741600 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr15:51737400-51749000 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr15:51737400-51750200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr15:51737600-51741600 Weak transcription Muscle Satellite Cultured Cells --
11 chr15:51737600-51749200 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr15:51737600-51762400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr15:51737800-51748800 Weak transcription NHDF-Ad bronchial
14 chr15:51737800-51758400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr15:51737800-51762400 Weak transcription Colonic Mucosa Colon
16 chr15:51738000-51742000 Weak transcription NH-A brain
17 chr15:51738000-51755400 Strong transcription Primary neutrophils fromperipheralblood blood
18 chr15:51738200-51748800 Weak transcription Fetal Brain Male brain
19 chr15:51738200-51784600 Weak transcription Stomach Mucosa stomach
20 chr15:51738400-51777400 Weak transcription Small Intestine intestine
21 chr15:51738600-51742600 Strong transcription Brain Angular Gyrus brain
22 chr15:51738600-51742600 Strong transcription Fetal Adrenal Gland Adrenal Gland
23 chr15:51738600-51743400 Strong transcription Brain Inferior Temporal Lobe brain
24 chr15:51738600-51744600 Strong transcription Adipose Nuclei Adipose
25 chr15:51738600-51751800 Strong transcription Rectal Mucosa Donor 31 rectum
26 chr15:51738800-51742600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr15:51738800-51743400 Strong transcription Placenta Placenta
28 chr15:51738800-51744600 Strong transcription Rectal Mucosa Donor 29 rectum
29 chr15:51738800-51752000 Weak transcription ES-WA7 Cell Line embryonic stem cell
30 chr15:51738800-51752200 Strong transcription Fetal Intestine Large intestine
31 chr15:51738800-51752600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr15:51739000-51742600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
33 chr15:51739000-51749400 Weak transcription GM12878-XiMat blood
34 chr15:51739000-51750200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr15:51739000-51752000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr15:51739000-51752000 Strong transcription Liver Liver
37 chr15:51739000-51776000 Weak transcription Gastric stomach
38 chr15:51739200-51743000 Strong transcription Duodenum Mucosa Duodenum
39 chr15:51739200-51743000 Strong transcription HSMMtube muscle
40 chr15:51739200-51744400 Strong transcription Duodenum Smooth Muscle Duodenum
41 chr15:51739200-51746800 Weak transcription Right Ventricle heart
42 chr15:51739200-51748800 Weak transcription Osteobl bone
43 chr15:51739400-51743000 Strong transcription Brain Cingulate Gyrus brain
44 chr15:51739400-51743400 Strong transcription Primary hematopoietic stem cells short term culture blood
45 chr15:51739400-51744800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr15:51739400-51747200 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr15:51739400-51747600 Weak transcription Ovary ovary
48 chr15:51739600-51742600 Genic enhancers A549 lung
49 chr15:51739600-51743600 Strong transcription HSMM muscle
50 chr15:51739800-51741600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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