Variant report

Variant	rs8031903
Chromosome Location	chr15:51838161-51838162
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr15:51833724..51835640-chr15:51837981..51840584,2	MCF-7	breast:
2	chr15:51830037..51835307-chr15:51835451..51839022,5	MCF-7	breast:
3	chr15:51836777..51838394-chr15:51842554..51844470,2	MCF-7	breast:
4	chr15:51716051..51718923-chr15:51836629..51839391,2	K562	blood:
5	chr15:51835902..51838646-chr15:51851787..51853381,2	MCF-7	breast:
6	chr15:51837957..51840448-chr15:51845565..51847843,2	K562	blood:

Extended variants
information (count: 229 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:225)

rs_ID	r²[population]
rs10220909	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1031664	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10438320	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10438321	0.84[ASN][1000 genomes]
rs10467923	0.96[CEU][hapmap];0.80[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10467924	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10519312	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10519313	0.96[CEU][hapmap];0.86[JPT][hapmap];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1077361	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10775144	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1080394	0.96[CEU][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10851500	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10851502	0.96[CEU][hapmap];0.83[CHB][hapmap];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11070851	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11070852	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11070853	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11070854	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11070855	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11070856	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11070857	0.96[CEU][hapmap];0.83[CHB][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11070859	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11070860	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11070862	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11070863	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11630336	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11630743	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11630842	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11631408	0.95[CEU][hapmap];0.80[CHB][hapmap];0.86[EUR][1000 genomes]
rs11632853	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11633395	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11633713	1.00[CEU][hapmap];0.87[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11634039	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11634110	0.89[EUR][1000 genomes]
rs11634180	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11634999	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11635216	1.00[CEU][hapmap];0.95[CHB][hapmap];0.86[JPT][hapmap];0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11635592	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11636170	1.00[CEU][hapmap];0.84[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11636428	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11638240	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12050586	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12050598	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12050600	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12101730	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12101920	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12102203	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12372948	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12438892	0.96[CEU][hapmap];0.83[CHB][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12440990	1.00[CEU][hapmap];0.83[CHB][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12441167	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12441759	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12442725	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12442803	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12442947	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12443007	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12443362	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12592179	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12592653	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12592889	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12593979	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12913493	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17524813	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17603116	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17609666	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17609693	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17609791	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17609812	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17609917	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs17609924	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1902592	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1902593	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1902594	0.93[EUR][1000 genomes]
rs2124592	0.96[CEU][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2124875	0.96[CEU][hapmap];0.83[CHB][hapmap];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2124876	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2124877	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2124878	1.00[CEU][hapmap];0.86[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2124879	0.87[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2278988	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2278989	0.96[CEU][hapmap];0.86[JPT][hapmap];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2278990	0.96[CEU][hapmap];0.86[JPT][hapmap];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2305708	1.00[CEU][hapmap];0.87[JPT][hapmap];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2414105	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2414106	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2414107	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2414109	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2414111	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2414113	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2414114	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28376817	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs28393906	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs28410165	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28415556	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs28428679	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs28431083	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28576876	0.80[EUR][1000 genomes]
rs28648597	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28680710	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28695624	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28795073	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs28854610	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28866855	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28878886	0.83[EUR][1000 genomes]
rs2899475	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2899476	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2899477	0.86[EUR][1000 genomes]
rs3736485	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs4143721	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4143722	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4143723	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4143724	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4144941	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4359386	0.97[ASN][1000 genomes]
rs4438255	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4462536	0.97[ASN][1000 genomes]
rs4462537	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4545756	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4774589	0.85[EUR][1000 genomes]
rs4774590	1.00[CHB][hapmap];0.95[JPT][hapmap];0.89[ASN][1000 genomes]
rs4774591	0.96[CEU][hapmap];0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4774592	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4774593	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4774595	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4774596	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4774597	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4774598	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4775943	0.96[CEU][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4775944	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4775946	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4775951	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4775952	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4775953	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4775955	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4775956	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4775958	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4775959	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4775960	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4775961	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4775963	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4775965	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4775966	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55981933	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs55982453	0.80[EUR][1000 genomes]
rs56189052	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs60060794	0.83[EUR][1000 genomes]
rs62014659	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62016017	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6493498	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs6493499	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6493500	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6493501	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6493503	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6493505	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6493510	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6493513	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs67524810	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7161973	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7162361	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7162412	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7162563	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7165887	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7167760	0.96[CEU][hapmap];0.86[EUR][1000 genomes]
rs7168546	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7168749	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7169753	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7169786	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7170217	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7170330	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7170444	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7171439	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7171884	0.81[CEU][hapmap]
rs7173880	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7174435	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7174495	0.96[CEU][hapmap];0.83[CHB][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7174655	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7176044	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7177471	1.00[CEU][hapmap];0.86[JPT][hapmap];0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7177720	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7181470	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7182977	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7183435	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7183479	0.96[CEU][hapmap];0.83[EUR][1000 genomes]
rs7495962	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs750162	1.00[CEU][hapmap];0.87[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs750163	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8023455	0.96[CEU][hapmap];0.83[EUR][1000 genomes]
rs8024506	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8028017	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs8030121	0.87[EUR][1000 genomes]
rs8030534	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs8031875	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs8034197	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs8035135	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8036609	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8036821	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8036904	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8037167	0.96[CEU][hapmap];0.86[JPT][hapmap];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs8037340	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs8037840	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8038101	0.82[EUR][1000 genomes]
rs8038203	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8038341	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs8039073	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs8039255	0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs8039835	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8040080	1.00[CEU][hapmap];0.87[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs8040538	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs8040648	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8041197	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8041514	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8042221	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8042289	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8042840	1.00[CEU][hapmap];0.86[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs882385	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs882386	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs930920	0.84[CEU][hapmap]
rs9708186	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9744054	0.86[EUR][1000 genomes]
rs9806598	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9920124	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9920145	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9944241	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9944259	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9944263	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9944264	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv471243	chr15:51345485-52018096	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
2	nsv904217	chr15:51695653-51881980	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
3	nsv904218	chr15:51743186-51873407	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv569405	chr15:51791559-51890282	Strong transcription Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs8031903	DMXL2	Cis_1M	lymphoblastoid	RTeQTL
rs8031903	DMXL2	cis	multi-tissue	Pritchard

Chromatin state (count:62 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:51776800-51855200	Weak transcription	Thymus	Thymus
2	chr15:51780400-51855800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr15:51780800-51839000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr15:51781400-51863000	Weak transcription	HSMM	muscle
5	chr15:51787400-51855400	Weak transcription	Osteobl	bone
6	chr15:51792400-51838400	Weak transcription	HSMMtube	muscle
7	chr15:51794600-51861000	Weak transcription	Gastric	stomach
8	chr15:51809000-51854800	Weak transcription	Brain Hippocampus Middle	brain
9	chr15:51816000-51861000	Weak transcription	Pancreas	Pancrea
10	chr15:51817800-51862200	Weak transcription	Fetal Brain Male	brain
11	chr15:51818200-51847600	Weak transcription	Rectal Smooth Muscle	rectum
12	chr15:51818200-51855400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
13	chr15:51818200-51861600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr15:51818400-51853400	Weak transcription	Lung	lung
15	chr15:51818400-51861200	Weak transcription	Fetal Stomach	stomach
16	chr15:51818800-51840200	Weak transcription	Hela-S3	cervix
17	chr15:51819200-51838200	Weak transcription	Colon Smooth Muscle	Colon
18	chr15:51819400-51852600	Weak transcription	Sigmoid Colon	Sigmoid Colon
19	chr15:51819400-51853400	Weak transcription	Ovary	ovary
20	chr15:51819600-51853400	Weak transcription	Duodenum Smooth Muscle	Duodenum
21	chr15:51819600-51861400	Weak transcription	Fetal Muscle Trunk	muscle
22	chr15:51819800-51863000	Weak transcription	Right Ventricle	heart
23	chr15:51822000-51849400	Strong transcription	Monocytes-CD14+_RO01746	blood
24	chr15:51822400-51840000	Strong transcription	Primary monocytes fromperipheralblood	blood
25	chr15:51824400-51854200	Weak transcription	Fetal Kidney	kidney
26	chr15:51824600-51855000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
27	chr15:51824600-51860600	Weak transcription	Brain Anterior Caudate	brain
28	chr15:51824600-51861000	Weak transcription	Left Ventricle	heart
29	chr15:51824800-51863200	Weak transcription	Primary hematopoietic stem cells	blood
30	chr15:51825000-51845600	Weak transcription	Brain Germinal Matrix	brain
31	chr15:51825600-51840000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr15:51826000-51853400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr15:51827000-51861600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
34	chr15:51827200-51838800	Weak transcription	NHLF	lung
35	chr15:51827400-51859800	Weak transcription	Fetal Intestine Small	intestine
36	chr15:51828600-51861200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
37	chr15:51828800-51868000	Weak transcription	Adipose Nuclei	Adipose
38	chr15:51828800-51868200	Weak transcription	Fetal Intestine Large	intestine
39	chr15:51829000-51853400	Weak transcription	Brain Inferior Temporal Lobe	brain
40	chr15:51829000-51855200	Weak transcription	Stomach Smooth Muscle	stomach
41	chr15:51829000-51856000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr15:51829000-51857000	Weak transcription	NHDF-Ad	bronchial
43	chr15:51829000-51859800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
44	chr15:51829000-51861000	Weak transcription	Fetal Lung	lung
45	chr15:51829000-51868800	Weak transcription	A549	lung
46	chr15:51829200-51861000	Weak transcription	Placenta	Placenta
47	chr15:51829400-51860600	Weak transcription	Fetal Brain Female	brain
48	chr15:51829400-51863200	Weak transcription	Dnd41	blood
49	chr15:51830000-51861000	Weak transcription	K562	blood
50	chr15:51831400-51868800	Weak transcription	Rectal Mucosa Donor 31	rectum

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