Variant report

Variant rs8028017
Chromosome Location chr15:51912708-51912709
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:51892600-51913000 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr15:51895200-51913000 Weak transcription HMEC breast
3 chr15:51903600-51913600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr15:51904200-51914000 Weak transcription Lung lung
5 chr15:51904400-51912800 Weak transcription Fetal Stomach stomach
6 chr15:51905200-51912800 Weak transcription Primary hematopoietic stem cells blood
7 chr15:51905200-51913000 Weak transcription NHDF-Ad bronchial
8 chr15:51905800-51912800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr15:51906000-51913000 Weak transcription Adipose Nuclei Adipose
10 chr15:51906200-51912800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr15:51906200-51914000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr15:51906200-51914000 Weak transcription Ovary ovary
13 chr15:51906200-51914000 Weak transcription Small Intestine intestine
14 chr15:51906400-51913000 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr15:51906800-51913000 Weak transcription Fetal Intestine Large intestine
16 chr15:51906800-51913000 Weak transcription Fetal Intestine Small intestine
17 chr15:51906800-51914200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr15:51907000-51914000 Weak transcription Psoas Muscle Psoas
19 chr15:51907400-51912800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr15:51910400-51912800 Weak transcription Fetal Kidney kidney
21 chr15:51911400-51912800 Enhancers Dnd41 blood
22 chr15:51911400-51913000 Enhancers Primary neutrophils fromperipheralblood blood
23 chr15:51911400-51913400 Flanking Active TSS Primary monocytes fromperipheralblood blood
24 chr15:51911400-51915800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
25 chr15:51911600-51912800 Enhancers Fetal Brain Male brain
26 chr15:51911600-51913000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr15:51911600-51913000 Enhancers Duodenum Mucosa Duodenum
28 chr15:51911600-51913200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr15:51911600-51916000 Active TSS Brain Inferior Temporal Lobe brain
30 chr15:51911800-51912800 Weak transcription Brain Cingulate Gyrus brain
31 chr15:51911800-51912800 Weak transcription Brain Hippocampus Middle brain
32 chr15:51911800-51914000 Weak transcription Esophagus oesophagus
33 chr15:51911800-51914400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
34 chr15:51912000-51913000 Weak transcription Rectal Smooth Muscle rectum
35 chr15:51912200-51912800 Enhancers Primary hematopoietic stem cells short term culture blood
36 chr15:51912200-51912800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr15:51912200-51912800 Enhancers Brain Angular Gyrus brain
38 chr15:51912200-51914000 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr15:51912200-51914200 Active TSS Brain Germinal Matrix brain
40 chr15:51912400-51912800 Enhancers Primary mononuclear cells fromperipheralblood Blood
41 chr15:51912400-51912800 Weak transcription Brain Substantia Nigra brain
42 chr15:51912400-51912800 Flanking Active TSS Fetal Brain Female brain
43 chr15:51912400-51912800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
44 chr15:51912400-51913000 Enhancers Colon Smooth Muscle Colon
45 chr15:51912400-51913200 Active TSS Stomach Smooth Muscle stomach
46 chr15:51912400-51913400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
47 chr15:51912400-51913400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr15:51912400-51913600 Flanking Active TSS GM12878-XiMat blood
49 chr15:51912600-51912800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr15:51912600-51912800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain

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