The 2.0 version of rSNPBase

Variant report

Variant rs12617393
Chromosome Location chr2:114632287-114632288
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:114596800-114632800 Weak transcription Primary T helper cells fromperipheralblood blood
2 chr2:114621200-114639600 Weak transcription GM12878-XiMat blood
3 chr2:114621400-114638400 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr2:114625800-114633800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr2:114626400-114635000 Weak transcription Primary B cells from cord blood blood
6 chr2:114626600-114634200 Weak transcription Thymus Thymus
7 chr2:114626600-114634400 Weak transcription Pancreas Pancrea
8 chr2:114626800-114635000 Weak transcription Primary B cells from peripheral blood blood
9 chr2:114629800-114632400 Enhancers Breast Myoepithelial Primary Cells Breast
10 chr2:114630200-114634200 Weak transcription NHLF lung
11 chr2:114630200-114634600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr2:114630200-114635000 Weak transcription HSMM muscle
13 chr2:114630200-114635200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr2:114630400-114634200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr2:114630400-114635000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr2:114630400-114635000 Weak transcription HSMMtube muscle
17 chr2:114630400-114635000 Weak transcription NHDF-Ad bronchial
18 chr2:114630400-114635200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr2:114630400-114635200 Weak transcription Osteobl bone
20 chr2:114630400-114635400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr2:114631200-114632400 Enhancers HUVEC blood vessel
22 chr2:114631200-114632600 Enhancers Monocytes-CD14+_RO01746 blood
23 chr2:114631400-114633400 Enhancers Primary monocytes fromperipheralblood blood
24 chr2:114631400-114635200 Weak transcription Small Intestine intestine
25 chr2:114631400-114644000 Weak transcription Spleen Spleen
26 chr2:114631600-114636400 Weak transcription Left Ventricle heart
27 chr2:114631800-114632400 Enhancers Rectal Mucosa Donor 29 rectum
28 chr2:114631800-114633200 Weak transcription Fetal Thymus thymus
29 chr2:114631800-114633400 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr2:114631800-114633600 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr2:114631800-114634400 Weak transcription NH-A brain
32 chr2:114631800-114635400 Weak transcription Adipose Nuclei Adipose
33 chr2:114631800-114639000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr2:114632000-114633400 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr2:114632000-114633800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr2:114632000-114633800 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr2:114632000-114634200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr2:114632000-114634200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr2:114632000-114634200 Weak transcription Hela-S3 cervix
40 chr2:114632000-114635200 Weak transcription Muscle Satellite Cultured Cells --
41 chr2:114632000-114635600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr2:114632200-114632400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr2:114632200-114633400 Weak transcription Primary T cells from cord blood blood
44 chr2:114632200-114633800 Weak transcription HMEC breast

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Last update: Aug 31, 2015