Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:212095965..212098227-chr2:212102071..212105031,2	MCF-7	breast:
2	chr2:212100928..212103328-chr2:212103645..212105970,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10195210	0.85[ASN][1000 genomes]
rs10497936	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12611962	0.97[ASN][1000 genomes]
rs12619699	0.85[ASN][1000 genomes]
rs12620896	0.91[ASN][1000 genomes]
rs12694230	0.86[ASN][1000 genomes]
rs13025294	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13389611	0.86[ASN][1000 genomes]
rs13419011	0.85[ASN][1000 genomes]
rs13432611	0.85[ASN][1000 genomes]
rs13432618	0.85[ASN][1000 genomes]
rs1437916	0.94[ASN][1000 genomes]
rs1465827	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1465828	0.91[ASN][1000 genomes]
rs16845716	0.98[ASN][1000 genomes]
rs1836732	0.86[ASN][1000 genomes]
rs2043790	0.97[ASN][1000 genomes]
rs4672608	0.95[ASN][1000 genomes]
rs4673601	1.00[ASN][1000 genomes]
rs57474880	0.82[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs71422736	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834522	chr2:212066442-212225328	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212102000-212102600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr2:212102200-212103000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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