Variant report
Variant | rs4672608 |
---|---|
Chromosome Location | chr2:212078938-212078939 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10195210 | 0.83[ASN][1000 genomes] |
rs10497936 | 0.95[ASN][1000 genomes] |
rs12611962 | 0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs12619699 | 0.83[ASN][1000 genomes] |
rs12620783 | 0.95[ASN][1000 genomes] |
rs12620896 | 0.87[ASN][1000 genomes] |
rs12694230 | 0.82[ASN][1000 genomes] |
rs13025294 | 0.81[ASN][1000 genomes] |
rs13389611 | 0.82[ASN][1000 genomes] |
rs13419011 | 0.83[ASN][1000 genomes] |
rs13432611 | 0.83[ASN][1000 genomes] |
rs13432618 | 0.83[ASN][1000 genomes] |
rs1437916 | 0.89[ASN][1000 genomes] |
rs1465827 | 0.95[ASN][1000 genomes] |
rs1465828 | 0.93[ASN][1000 genomes] |
rs16845716 | 0.97[ASN][1000 genomes] |
rs1836732 | 0.82[ASN][1000 genomes] |
rs2043790 | 0.98[ASN][1000 genomes] |
rs4673601 | 0.95[ASN][1000 genomes] |
rs57474880 | 0.89[ASN][1000 genomes] |
rs71422736 | 0.95[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv460064 | chr2:212045919-212101698 | Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription | Chromatin interactive region | n/a | inside rSNPs | diseases |
2 | nsv470511 | chr2:212045919-212101698 | Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription | Chromatin interactive region | n/a | inside rSNPs | diseases |
3 | nsv584312 | chr2:212045919-212101698 | Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription | Chromatin interactive region | n/a | inside rSNPs | diseases |
4 | nsv834522 | chr2:212066442-212225328 | Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
5 | esv3459966 | chr2:212078710-212080602 | Enhancers | n/a | n/a | inside rSNPs | diseases |
6 | esv3459965 | chr2:212078798-212080512 | Enhancers | n/a | n/a | inside rSNPs | diseases |
7 | esv3459967 | chr2:212078798-212080512 | Enhancers | n/a | n/a | inside rSNPs | diseases |
8 | esv14898 | chr2:212078897-212080615 | Enhancers | n/a | n/a | inside rSNPs | diseases |
9 | nsv515773 | chr2:212078938-212079450 | Enhancers | n/a | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:212078600-212079000 | Enhancers | Rectal Mucosa Donor 29 | rectum |