Variant report

Variant rs12647117
Chromosome Location chr4:10022059-10022060
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:10019600-10022200 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr4:10020200-10024600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
3 chr4:10020600-10023400 Flanking Active TSS Liver Liver
4 chr4:10020800-10022600 Flanking Active TSS HMEC breast
5 chr4:10020800-10023000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr4:10020800-10023200 Enhancers Small Intestine intestine
7 chr4:10021000-10022400 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr4:10021000-10022600 Enhancers Esophagus oesophagus
9 chr4:10021000-10023000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr4:10021000-10023200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
11 chr4:10021000-10024800 Enhancers Lung lung
12 chr4:10021200-10022400 Weak transcription HSMM muscle
13 chr4:10021200-10022600 Enhancers Placenta Placenta
14 chr4:10021200-10022800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr4:10021200-10023000 Weak transcription Primary hematopoietic stem cells blood
16 chr4:10021200-10024200 Enhancers Fetal Stomach stomach
17 chr4:10021200-10025600 Enhancers Primary B cells from cord blood blood
18 chr4:10021200-10025800 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr4:10021200-10026400 Enhancers Primary Natural Killer cells fromperipheralblood blood
20 chr4:10021200-10027400 Enhancers Right Atrium heart
21 chr4:10021400-10022200 Enhancers Primary monocytes fromperipheralblood blood
22 chr4:10021400-10022200 Enhancers Fetal Intestine Large intestine
23 chr4:10021400-10022400 Weak transcription Muscle Satellite Cultured Cells --
24 chr4:10021400-10022400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
25 chr4:10021400-10022400 Enhancers Brain Hippocampus Middle brain
26 chr4:10021400-10022400 Weak transcription Psoas Muscle Psoas
27 chr4:10021400-10022600 Weak transcription Primary B cells from peripheral blood blood
28 chr4:10021400-10022600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr4:10021400-10022600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
30 chr4:10021400-10022600 Weak transcription HUVEC blood vessel
31 chr4:10021400-10022800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr4:10021400-10022800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr4:10021400-10023000 Weak transcription Brain Cingulate Gyrus brain
34 chr4:10021400-10023000 Enhancers Pancreas Pancrea
35 chr4:10021400-10023000 Weak transcription Rectal Smooth Muscle rectum
36 chr4:10021400-10023200 Enhancers Fetal Brain Male brain
37 chr4:10021400-10023400 Weak transcription Brain Substantia Nigra brain
38 chr4:10021400-10024200 Weak transcription GM12878-XiMat blood
39 chr4:10021400-10024800 Enhancers Left Ventricle heart
40 chr4:10021400-10025200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr4:10021400-10025200 Weak transcription NH-A brain
42 chr4:10021400-10026200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr4:10021400-10026200 Enhancers Adipose Nuclei Adipose
44 chr4:10021400-10026400 Enhancers Fetal Muscle Leg muscle
45 chr4:10021400-10029600 Weak transcription A549 lung
46 chr4:10021400-10032000 Weak transcription HSMMtube muscle
47 chr4:10021600-10022200 Flanking Active TSS HepG2 liver
48 chr4:10021600-10022400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr4:10021600-10022400 Enhancers Duodenum Smooth Muscle Duodenum
50 chr4:10021600-10022600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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