Variant report

Variant	rs2276961
Chromosome Location	chr4:10022981-10022982
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	HEY1	chr4:10022926-10023310	HepG2	liver:	n/a	n/a
2	EP300	chr4:10022833-10023208	HepG2	liver:	n/a	n/a
3	MXI1	chr4:10022388-10023345	HepG2	liver:	n/a	chr4:10022445-10022454
4	TBP	chr4:10022931-10023385	HepG2	liver:	n/a	n/a
5	HDAC2	chr4:10022889-10023335	HepG2	liver:	n/a	chr4:10023301-10023315 chr4:10023305-10023319 chr4:10023304-10023318 chr4:10023300-10023314 chr4:10023299-10023313 chr4:10023303-10023317 chr4:10023302-10023316
6	POLR2A	chr4:10022899-10023315	HepG2	liver:	n/a	n/a
7	NFIC	chr4:10022876-10023315	HepG2	liver:	n/a	n/a
8	CHD2	chr4:10022808-10023110	HepG2	liver:	n/a	n/a
9	CEBPB	chr4:10022923-10023348	HepG2	liver:	n/a	chr4:10023167-10023178
10	POLR2A	chr4:10022555-10023336	HepG2	liver:	n/a	n/a
11	HNF4G	chr4:10022886-10023332	HepG2	liver:	n/a	chr4:10023081-10023089 chr4:10023122-10023137 chr4:10023124-10023139
12	POLR2A	chr4:10022808-10023434	HepG2	liver:	n/a	n/a
13	POLR2A	chr4:10022959-10023224	HepG2	liver:	n/a	n/a
14	E2F4	chr4:10022956-10023432	MCF10A-Er-Src	breast:	n/a	n/a
15	SP1	chr4:10022900-10023291	HepG2	liver:	n/a	n/a
16	RXRA	chr4:10022960-10023305	HepG2	liver:	n/a	n/a
17	MYBL2	chr4:10022789-10023427	HepG2	liver:	n/a	n/a
18	REST	chr4:10022895-10023302	HepG2	liver:	n/a	n/a
19	MBD4	chr4:10022785-10023369	HepG2	liver:	n/a	n/a
20	POLR2A	chr4:10022651-10023377	MCF10A-Er-Src	breast:	n/a	n/a
21	EP300	chr4:10022906-10023384	HepG2	liver:	n/a	n/a
22	CEBPB	chr4:10022980-10023677	HepG2	liver:	n/a	chr4:10023167-10023178
23	MAX	chr4:10022935-10023118	HepG2	liver:	n/a	n/a
24	HNF4G	chr4:10022885-10023402	HepG2	liver:	n/a	chr4:10023081-10023089 chr4:10023122-10023137 chr4:10023124-10023139
25	ELF1	chr4:10022929-10023239	HepG2	liver:	n/a	n/a
26	HNF4A	chr4:10022972-10023292	HepG2	liver:	n/a	chr4:10023123-10023138 chr4:10023081-10023089 chr4:10023124-10023139
27	CEBPD	chr4:10022930-10023227	HepG2	liver:	n/a	n/a
28	EP300	chr4:10022913-10023385	HepG2	liver:	n/a	n/a
29	CEBPB	chr4:10022929-10023684	HepG2	liver:	n/a	chr4:10023167-10023178
30	ZBTB7A	chr4:10022949-10023219	HepG2	liver:	n/a	n/a
31	POLR2A	chr4:10022747-10023214	HepG2	liver:	n/a	n/a
32	POLR2A	chr4:10022974-10023277	MCF10A-Er-Src	breast:	n/a	n/a
33	ZBTB7A	chr4:10022929-10023214	HepG2	liver:	n/a	n/a
34	ELF1	chr4:10022874-10023266	HepG2	liver:	n/a	n/a
35	MYBL2	chr4:10022845-10023396	HepG2	liver:	n/a	n/a
36	MAZ	chr4:10022926-10023283	HepG2	liver:	n/a	n/a
37	POLR2A	chr4:10022833-10023302	HepG2	liver:	n/a	n/a
38	RCOR1	chr4:10022565-10023204	HepG2	liver:	n/a	n/a
39	HEY1	chr4:10022587-10023613	HepG2	liver:	n/a	n/a
40	TEAD4	chr4:10022847-10023415	HepG2	liver:	n/a	n/a
41	POLR2A	chr4:10022628-10023345	HepG2	liver:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:10020622..10022306-chr4:10022841..10025006,2	MCF-7	breast:

Variant related genes	Relation type
SLC2A9	TF binding region
ENSG00000109667	Chromatin interaction

Extended variants
information (count: 103 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:68)

rs_ID	r²[population]
rs10939655	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10939656	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10939665	0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10939669	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11722930	0.83[AFR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11727199	0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11731110	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11732054	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11734375	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11734786	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11736410	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11736479	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12499857	0.81[EUR][1000 genomes]
rs12500810	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12506364	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12506455	0.89[AFR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12506932	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12507050	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12507330	0.87[EUR][1000 genomes]
rs12508991	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12647117	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13101785	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13107466	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13113730	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13121211	0.87[EUR][1000 genomes]
rs13128214	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13133766	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13137074	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13137343	0.81[AFR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13137795	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13141233	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13145442	0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13149985	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13150928	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17187075	0.84[EUR][1000 genomes]
rs17246745	0.85[EUR][1000 genomes]
rs17247314	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2240720	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2240721	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2240722	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2240724	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34501273	0.86[EUR][1000 genomes]
rs34709913	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs35099040	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35250962	0.81[AFR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35438220	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs35501905	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35750364	0.81[AFR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35866697	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs36084205	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3733584	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3733585	0.83[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3733586	0.86[EUR][1000 genomes]
rs3756236	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3756237	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3756238	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3796829	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3796832	0.87[EUR][1000 genomes]
rs3796836	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3796842	0.86[EUR][1000 genomes]
rs4280729	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4622999	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs55959894	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62293415	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6844329	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6857693	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7678012	0.85[EUR][1000 genomes]
rs7679916	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:35 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533218	chr4:9371016-10252290	Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	74 gene(s)	inside rSNPs	diseases
2	nsv530090	chr4:9383695-10165033	Enhancers Genic enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	70 gene(s)	inside rSNPs	diseases
3	nsv1014216	chr4:9713612-10223836	Transcr. at gene 5' and 3' Genic enhancers Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	53 gene(s)	inside rSNPs	diseases
4	nsv1010249	chr4:9716101-10086188	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	15 gene(s)	inside rSNPs	diseases
5	nsv878681	chr4:9802853-10397327	Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	51 gene(s)	inside rSNPs	diseases
6	nsv997941	chr4:9805223-10493388	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	54 gene(s)	inside rSNPs	diseases
7	nsv1008649	chr4:9805223-10589802	Weak transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
8	nsv1000587	chr4:9805223-10610752	Flanking Active TSS Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
9	nsv537022	chr4:9805223-10610752	Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
10	nsv1003454	chr4:9805223-10710990	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
11	nsv537023	chr4:9805223-10710990	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
12	nsv1004801	chr4:9814720-10674528	Enhancers Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
13	nsv537024	chr4:9814720-10674528	Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
14	nsv931483	chr4:9814721-10716463	Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
15	esv2763339	chr4:9858426-10056376	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
16	nsv537026	chr4:9903566-10262258	Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	48 gene(s)	inside rSNPs	diseases
17	nsv1009972	chr4:9903566-10710990	Genic enhancers Enhancers Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
18	nsv537027	chr4:9903566-10710990	Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
19	esv2752052	chr4:9911872-10313111	Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	51 gene(s)	inside rSNPs	diseases
20	nsv878688	chr4:9915850-10038112	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
21	nsv1010620	chr4:9937123-10686682	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
22	nsv530280	chr4:9947818-10940041	Enhancers Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	66 gene(s)	inside rSNPs	diseases
23	nsv532706	chr4:9948018-10451450	Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
24	nsv1013022	chr4:9961220-10230042	Active TSS Strong transcription Weak transcription Genic enhancers Enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	46 gene(s)	inside rSNPs	diseases
25	nsv537028	chr4:9961220-10230042	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	46 gene(s)	inside rSNPs	diseases
26	nsv537029	chr4:9961220-10262258	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	47 gene(s)	inside rSNPs	diseases
27	nsv878691	chr4:9966477-10418078	Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
28	nsv1013487	chr4:9972011-10320963	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
29	nsv829857	chr4:9982514-10155835	Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases
30	nsv469621	chr4:9987670-10142287	Flanking Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases
31	nsv482719	chr4:9987670-10142287	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases
32	nsv1008067	chr4:10004664-10262258	Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	47 gene(s)	inside rSNPs	diseases
33	nsv537030	chr4:10004664-10262258	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	47 gene(s)	inside rSNPs	diseases
34	nsv593691	chr4:10013173-10050141	Bivalent Enhancer Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
35	nsv869057	chr4:10013411-10875454	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	65 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:76 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:10020200-10024600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
2	chr4:10020600-10023400	Flanking Active TSS	Liver	Liver
3	chr4:10020800-10023000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr4:10020800-10023200	Enhancers	Small Intestine	intestine
5	chr4:10021000-10023000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr4:10021000-10023200	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
7	chr4:10021000-10024800	Enhancers	Lung	lung
8	chr4:10021200-10023000	Weak transcription	Primary hematopoietic stem cells	blood
9	chr4:10021200-10024200	Enhancers	Fetal Stomach	stomach
10	chr4:10021200-10025600	Enhancers	Primary B cells from cord blood	blood
11	chr4:10021200-10025800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
12	chr4:10021200-10026400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
13	chr4:10021200-10027400	Enhancers	Right Atrium	heart
14	chr4:10021400-10023000	Weak transcription	Brain Cingulate Gyrus	brain
15	chr4:10021400-10023000	Enhancers	Pancreas	Pancrea
16	chr4:10021400-10023000	Weak transcription	Rectal Smooth Muscle	rectum
17	chr4:10021400-10023200	Enhancers	Fetal Brain Male	brain
18	chr4:10021400-10023400	Weak transcription	Brain Substantia Nigra	brain
19	chr4:10021400-10024200	Weak transcription	GM12878-XiMat	blood
20	chr4:10021400-10024800	Enhancers	Left Ventricle	heart
21	chr4:10021400-10025200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr4:10021400-10025200	Weak transcription	NH-A	brain
23	chr4:10021400-10026200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
24	chr4:10021400-10026200	Enhancers	Adipose Nuclei	Adipose
25	chr4:10021400-10026400	Enhancers	Fetal Muscle Leg	muscle
26	chr4:10021400-10029600	Weak transcription	A549	lung
27	chr4:10021400-10032000	Weak transcription	HSMMtube	muscle
28	chr4:10021600-10023000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr4:10021600-10023800	Weak transcription	Brain Anterior Caudate	brain
30	chr4:10021600-10023800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
31	chr4:10021600-10023800	Enhancers	Stomach Smooth Muscle	stomach
32	chr4:10021600-10024000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr4:10021600-10025200	Weak transcription	Rectal Mucosa Donor 31	rectum
34	chr4:10021600-10026000	Enhancers	Right Ventricle	heart
35	chr4:10021600-10026000	Enhancers	Skeletal Muscle Female	skeletal muscle
36	chr4:10021600-10035200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr4:10021800-10032000	Weak transcription	Fetal Heart	heart
38	chr4:10022000-10023000	Weak transcription	Stomach Mucosa	stomach
39	chr4:10022000-10023200	Flanking Active TSS	Duodenum Mucosa	Duodenum
40	chr4:10022000-10023200	Flanking Active TSS	Fetal Intestine Small	intestine
41	chr4:10022200-10023000	Enhancers	Sigmoid Colon	Sigmoid Colon
42	chr4:10022200-10023200	Enhancers	Colonic Mucosa	Colon
43	chr4:10022200-10023400	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
44	chr4:10022200-10025000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
45	chr4:10022200-10025200	Enhancers	Spleen	Spleen
46	chr4:10022200-10025400	Enhancers	Primary hematopoietic stem cells short term culture	blood
47	chr4:10022400-10023200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
48	chr4:10022400-10023400	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
49	chr4:10022400-10024200	Enhancers	Psoas Muscle	Psoas
50	chr4:10022600-10023000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

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