Variant report

Variant rs3796842
Chromosome Location chr4:9995851-9995852
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:9963400-9996400 Weak transcription Adipose Nuclei Adipose
2 chr4:9977800-10003600 Weak transcription Fetal Muscle Leg muscle
3 chr4:9978200-9996400 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr4:9980800-10007200 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr4:9982800-10002800 Weak transcription Gastric stomach
6 chr4:9985800-9997400 Strong transcription HMEC breast
7 chr4:9987400-9996400 Weak transcription Aorta Aorta
8 chr4:9987600-9998000 Weak transcription Ovary ovary
9 chr4:9987600-10008000 Weak transcription Stomach Smooth Muscle stomach
10 chr4:9988200-9996400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr4:9988400-9996800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr4:9989200-9999600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr4:9989600-9997600 Strong transcription HepG2 liver
14 chr4:9989600-9997800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr4:9989600-9998800 Strong transcription Breast Myoepithelial Primary Cells Breast
16 chr4:9990000-9997600 Weak transcription Stomach Mucosa stomach
17 chr4:9990400-9999600 Weak transcription Fetal Stomach stomach
18 chr4:9991400-10001400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr4:9991600-9999000 Strong transcription NHEK skin
20 chr4:9991600-10007200 Weak transcription Colon Smooth Muscle Colon
21 chr4:9991800-9998000 Weak transcription Right Ventricle heart
22 chr4:9992400-10006800 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr4:9992600-9997800 Weak transcription Brain Anterior Caudate brain
24 chr4:9992600-10007200 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr4:9992800-9997400 Weak transcription Brain Substantia Nigra brain
26 chr4:9992800-9997800 Weak transcription Brain Cingulate Gyrus brain
27 chr4:9993000-10006800 Strong transcription Primary monocytes fromperipheralblood blood
28 chr4:9993200-10006800 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr4:9993600-10008000 Weak transcription Left Ventricle heart
30 chr4:9993800-9998200 Strong transcription Liver Liver
31 chr4:9995000-9996200 Strong transcription Esophagus oesophagus
32 chr4:9995200-9996800 Enhancers GM12878-XiMat blood
33 chr4:9995200-9999200 Genic enhancers Fetal Intestine Small intestine
34 chr4:9995400-9996400 Enhancers Rectal Mucosa Donor 31 rectum
35 chr4:9995400-9998000 Genic enhancers Fetal Intestine Large intestine
36 chr4:9995400-9998000 Weak transcription Lung lung
37 chr4:9995600-9996000 Enhancers Colonic Mucosa Colon
38 chr4:9995600-9996200 Enhancers Rectal Mucosa Donor 29 rectum
39 chr4:9995600-9996400 Enhancers Primary T killer naive cells fromperipheralblood blood
40 chr4:9995600-9996400 Enhancers Duodenum Mucosa Duodenum
41 chr4:9995600-9998000 Weak transcription Pancreas Pancrea
42 chr4:9995800-9996400 Enhancers Primary T helper naive cells fromperipheralblood blood

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