Variant report

Variant	rs13103879
Chromosome Location	chr4:9972879-9972880
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:9959731..9961810-chr4:9971031..9973164,2	K562	blood:

Extended variants
information (count: 197 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:158)

rs_ID	r²[population]
rs10017674	0.80[CEU][hapmap];0.87[YRI][hapmap];0.81[AFR][1000 genomes]
rs10018204	0.84[CEU][hapmap];0.85[YRI][hapmap];0.80[AFR][1000 genomes]
rs10939620	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10939655	0.81[ASN][1000 genomes]
rs10939656	0.81[ASN][1000 genomes]
rs10939665	0.81[CEU][hapmap];0.90[JPT][hapmap]
rs10939669	0.81[CEU][hapmap];0.81[CHB][hapmap];0.86[JPT][hapmap]
rs1122141	0.95[CEU][hapmap];0.90[CHB][hapmap];0.95[JPT][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11722930	0.81[CEU][hapmap];0.81[CHB][hapmap];0.91[JPT][hapmap]
rs11722989	0.80[JPT][hapmap]
rs11723016	0.85[JPT][hapmap]
rs11723382	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11723591	0.87[CEU][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11723970	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11724510	0.84[CEU][hapmap]
rs11727199	0.80[CEU][hapmap];0.81[CHB][hapmap];0.86[JPT][hapmap]
rs11731110	0.81[CEU][hapmap];0.81[CHB][hapmap];0.91[JPT][hapmap]
rs11732054	0.91[ASN][1000 genomes]
rs11736410	0.81[ASN][1000 genomes]
rs11736479	0.81[ASN][1000 genomes]
rs12498150	0.86[YRI][hapmap]
rs12498956	0.85[YRI][hapmap]
rs12499857	0.95[CHB][hapmap];0.95[JPT][hapmap];0.90[ASN][1000 genomes]
rs12506122	0.81[CEU][hapmap]
rs12506455	0.81[CEU][hapmap];0.81[CHB][hapmap];0.90[JPT][hapmap]
rs12507050	0.87[ASN][1000 genomes]
rs12508991	0.81[CEU][hapmap];0.81[CHB][hapmap];0.90[JPT][hapmap]
rs13101785	0.81[CEU][hapmap];0.81[CHB][hapmap];0.86[JPT][hapmap]
rs13103690	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13107466	0.81[ASN][1000 genomes]
rs13110307	0.81[CEU][hapmap]
rs13112015	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13113730	0.80[ASN][1000 genomes]
rs13115193	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13122290	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13124563	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13129453	0.81[CEU][hapmap]
rs13133766	0.84[CEU][hapmap];0.81[CHB][hapmap];0.91[JPT][hapmap];0.81[ASN][1000 genomes]
rs13137343	0.81[CEU][hapmap];0.81[CHB][hapmap];0.86[JPT][hapmap]
rs13139055	0.80[CEU][hapmap]
rs13328050	0.80[CEU][hapmap];0.86[YRI][hapmap]
rs17185835	0.85[CEU][hapmap];0.86[YRI][hapmap]
rs17185870	0.85[CEU][hapmap];0.86[YRI][hapmap];0.80[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs17187075	0.84[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs17245436	0.85[CEU][hapmap];0.86[YRI][hapmap]
rs17245723	0.80[EUR][1000 genomes]
rs17246501	0.88[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17246745	0.92[ASN][1000 genomes]
rs17247314	0.83[CEU][hapmap];0.89[CHB][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs2240720	0.84[CEU][hapmap];0.91[JPT][hapmap]
rs2240721	0.84[CEU][hapmap];0.80[CHB][hapmap];0.82[JPT][hapmap]
rs2240724	0.84[CEU][hapmap];0.81[CHB][hapmap];0.91[JPT][hapmap]
rs28513781	0.80[AFR][1000 genomes]
rs28558552	0.80[AFR][1000 genomes]
rs28610447	0.81[EUR][1000 genomes]
rs28613263	0.80[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs35099040	0.81[ASN][1000 genomes]
rs35438220	0.91[ASN][1000 genomes]
rs35866697	0.81[ASN][1000 genomes]
rs35908990	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3733585	0.90[JPT][hapmap]
rs3733586	0.91[ASN][1000 genomes]
rs3756236	0.84[CEU][hapmap];0.81[CHB][hapmap];0.90[JPT][hapmap];0.81[ASN][1000 genomes]
rs3756237	0.81[ASN][1000 genomes]
rs3756238	0.81[ASN][1000 genomes]
rs3775940	0.83[CEU][hapmap]
rs3796829	0.81[ASN][1000 genomes]
rs3796836	0.82[ASN][1000 genomes]
rs3796842	0.84[CEU][hapmap]
rs4235346	0.88[CEU][hapmap];0.90[CHB][hapmap];0.95[JPT][hapmap];0.80[YRI][hapmap];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4235347	0.80[CEU][hapmap];0.85[YRI][hapmap]
rs4292328	0.89[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4295261	0.80[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs4311316	0.80[CEU][hapmap];0.85[YRI][hapmap]
rs4312757	0.82[YRI][hapmap]
rs4314284	0.80[CEU][hapmap];0.85[YRI][hapmap]
rs4444830	0.80[JPT][hapmap]
rs4447861	0.85[YRI][hapmap]
rs4447863	0.84[CHB][hapmap];0.95[JPT][hapmap];0.80[YRI][hapmap];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4455410	0.80[CEU][hapmap]
rs4459990	0.80[CEU][hapmap];0.85[YRI][hapmap]
rs4473653	0.81[CEU][hapmap];0.82[EUR][1000 genomes]
rs4515163	0.85[CEU][hapmap];0.86[YRI][hapmap];0.80[AFR][1000 genomes]
rs4519796	0.81[YRI][hapmap]
rs4529049	0.83[CEU][hapmap]
rs4543113	0.92[CEU][hapmap]
rs4560411	0.84[YRI][hapmap]
rs4588456	0.80[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs4622999	0.89[CHB][hapmap];0.90[JPT][hapmap];0.87[ASN][1000 genomes]
rs4697698	0.88[CEU][hapmap];0.90[CHB][hapmap];0.95[JPT][hapmap];0.80[YRI][hapmap];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4697914	0.81[CEU][hapmap];0.86[YRI][hapmap]
rs58130873	0.84[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs60045583	0.81[EUR][1000 genomes]
rs62294329	0.80[AFR][1000 genomes]
rs62294332	0.80[AFR][1000 genomes]
rs62295971	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6449140	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6449155	0.81[CEU][hapmap];0.86[YRI][hapmap];0.80[AFR][1000 genomes]
rs6449156	0.86[YRI][hapmap]
rs6449157	0.85[CEU][hapmap]
rs6449159	0.85[CEU][hapmap];0.86[YRI][hapmap];0.80[AFR][1000 genomes]
rs6449166	0.80[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs6449167	0.80[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs6449171	0.84[CEU][hapmap];0.80[EUR][1000 genomes]
rs6449172	0.85[CEU][hapmap];0.82[YRI][hapmap];0.83[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs6449174	0.84[CEU][hapmap];0.80[EUR][1000 genomes]
rs6449176	0.85[CEU][hapmap];0.85[YRI][hapmap];0.83[AFR][1000 genomes]
rs6449178	0.84[CEU][hapmap];0.81[EUR][1000 genomes]
rs6449179	0.85[CEU][hapmap];0.86[YRI][hapmap];0.81[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs6449183	1.00[CEU][hapmap];0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6449196	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6449201	0.85[CEU][hapmap];0.82[EUR][1000 genomes]
rs6449202	0.84[CEU][hapmap];0.82[EUR][1000 genomes]
rs68107257	0.80[AFR][1000 genomes]
rs6814664	0.81[CEU][hapmap];0.86[YRI][hapmap]
rs6815001	0.83[CEU][hapmap];0.86[YRI][hapmap];0.80[AFR][1000 genomes]
rs6823361	0.85[CEU][hapmap];0.80[EUR][1000 genomes]
rs6827754	0.83[CEU][hapmap]
rs6834893	0.84[CEU][hapmap];0.85[YRI][hapmap];0.80[AFR][1000 genomes]
rs6836706	0.85[CEU][hapmap];0.86[YRI][hapmap];0.80[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs6839490	0.81[CEU][hapmap];0.86[YRI][hapmap];0.80[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs6840802	0.80[CEU][hapmap];0.85[YRI][hapmap];0.80[EUR][1000 genomes]
rs6843873	0.85[CEU][hapmap];0.86[YRI][hapmap];0.80[AFR][1000 genomes]
rs6844316	0.85[CEU][hapmap];0.86[YRI][hapmap]
rs6844787	0.80[AFR][1000 genomes]
rs6845554	0.83[CEU][hapmap]
rs6849273	0.84[CEU][hapmap]
rs6849717	0.88[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6849729	0.85[CEU][hapmap];0.86[YRI][hapmap];0.80[AFR][1000 genomes]
rs6850143	0.87[CEU][hapmap];0.88[YRI][hapmap];0.80[AFR][1000 genomes]
rs6850684	0.84[CEU][hapmap]
rs6852441	0.85[CEU][hapmap];0.82[EUR][1000 genomes]
rs6856127	0.88[CEU][hapmap];0.86[YRI][hapmap];0.81[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs6857693	0.81[ASN][1000 genomes]
rs73227883	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7375587	0.80[CEU][hapmap]
rs7375599	0.88[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.80[YRI][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7375643	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7376948	0.81[CEU][hapmap]
rs7378305	0.81[CEU][hapmap];0.86[YRI][hapmap]
rs7378340	0.80[CEU][hapmap];0.85[YRI][hapmap]
rs7435196	0.85[CEU][hapmap]
rs7658170	0.84[CEU][hapmap];0.85[YRI][hapmap];0.83[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs7663097	0.96[CEU][hapmap];0.96[YRI][hapmap];0.82[AFR][1000 genomes]
rs7672947	0.85[CEU][hapmap];0.86[YRI][hapmap];0.80[AFR][1000 genomes]
rs7676733	0.85[CEU][hapmap];0.86[YRI][hapmap];0.83[AFR][1000 genomes]
rs7677710	0.85[CEU][hapmap];0.86[YRI][hapmap];0.83[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs7678012	0.84[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs7679916	0.90[JPT][hapmap]
rs7683283	0.85[CEU][hapmap];0.86[YRI][hapmap];0.83[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs7699512	0.80[JPT][hapmap]
rs882222	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs882223	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs998675	0.88[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs998676	0.89[CEU][hapmap];0.90[CHB][hapmap];0.95[JPT][hapmap]
rs9993410	0.86[YRI][hapmap]
rs9994266	0.80[CEU][hapmap];0.85[YRI][hapmap]
rs9994937	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:39 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533218	chr4:9371016-10252290	Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	74 gene(s)	inside rSNPs	diseases
2	nsv530090	chr4:9383695-10165033	Enhancers Genic enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	70 gene(s)	inside rSNPs	diseases
3	nsv1014216	chr4:9713612-10223836	Transcr. at gene 5' and 3' Genic enhancers Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	53 gene(s)	inside rSNPs	diseases
4	nsv1010249	chr4:9716101-10086188	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	15 gene(s)	inside rSNPs	diseases
5	nsv878672	chr4:9786732-10008305	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
6	nsv878676	chr4:9797703-9978094	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
7	nsv878677	chr4:9797703-10008305	Enhancers Genic enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
8	nsv878681	chr4:9802853-10397327	Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	51 gene(s)	inside rSNPs	diseases
9	nsv997941	chr4:9805223-10493388	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	54 gene(s)	inside rSNPs	diseases
10	nsv1008649	chr4:9805223-10589802	Weak transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
11	nsv1000587	chr4:9805223-10610752	Flanking Active TSS Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
12	nsv537022	chr4:9805223-10610752	Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
13	nsv1003454	chr4:9805223-10710990	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
14	nsv537023	chr4:9805223-10710990	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
15	nsv1004801	chr4:9814720-10674528	Enhancers Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
16	nsv537024	chr4:9814720-10674528	Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
17	nsv931483	chr4:9814721-10716463	Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
18	nsv1004311	chr4:9825814-9978414	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
19	esv2763339	chr4:9858426-10056376	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
20	nsv878684	chr4:9863698-9998440	Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
21	nsv878686	chr4:9893403-10008305	Flanking Active TSS Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
22	nsv537026	chr4:9903566-10262258	Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	48 gene(s)	inside rSNPs	diseases
23	nsv1009972	chr4:9903566-10710990	Genic enhancers Enhancers Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
24	nsv537027	chr4:9903566-10710990	Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
25	esv2752052	chr4:9911872-10313111	Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	51 gene(s)	inside rSNPs	diseases
26	nsv878687	chr4:9912101-10008305	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
27	nsv878688	chr4:9915850-10038112	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
28	nsv1010620	chr4:9937123-10686682	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
29	nsv878689	chr4:9943185-10008305	Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
30	nsv878690	chr4:9944650-10008305	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
31	nsv530280	chr4:9947818-10940041	Enhancers Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	66 gene(s)	inside rSNPs	diseases
32	nsv532706	chr4:9948018-10451450	Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
33	nsv1013022	chr4:9961220-10230042	Active TSS Strong transcription Weak transcription Genic enhancers Enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	46 gene(s)	inside rSNPs	diseases
34	nsv537028	chr4:9961220-10230042	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	46 gene(s)	inside rSNPs	diseases
35	nsv537029	chr4:9961220-10262258	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	47 gene(s)	inside rSNPs	diseases
36	nsv878691	chr4:9966477-10418078	Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
37	esv1820626	chr4:9966925-9974186	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
38	esv1818660	chr4:9967053-9974049	Strong transcription Enhancers Weak transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
39	nsv1013487	chr4:9972011-10320963	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:9911400-9979800	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr4:9944000-9979400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr4:9949800-9979400	Weak transcription	Liver	Liver
4	chr4:9958600-9984800	Weak transcription	Aorta	Aorta
5	chr4:9963400-9996400	Weak transcription	Adipose Nuclei	Adipose
6	chr4:9964200-9986600	Weak transcription	Ovary	ovary
7	chr4:9964400-9980800	Weak transcription	Esophagus	oesophagus
8	chr4:9964800-9979200	Weak transcription	Duodenum Mucosa	Duodenum
9	chr4:9970000-9988600	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr4:9970000-9989800	Weak transcription	Rectal Smooth Muscle	rectum
11	chr4:9970400-9982600	Weak transcription	Gastric	stomach
12	chr4:9970600-9991200	Weak transcription	Skeletal Muscle Male	skeletal muscle
13	chr4:9971200-9973800	Weak transcription	Small Intestine	intestine
14	chr4:9972000-9973400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr4:9972000-9978400	Weak transcription	HMEC	breast
16	chr4:9972000-9978600	Weak transcription	Fetal Intestine Large	intestine
17	chr4:9972000-9980800	Weak transcription	Pancreas	Pancrea
18	chr4:9972200-9973000	Weak transcription	Dnd41	blood
19	chr4:9972200-9973400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
20	chr4:9972200-9978200	Weak transcription	NHEK	skin
21	chr4:9972200-9979400	Weak transcription	Fetal Intestine Small	intestine
22	chr4:9972200-9980600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr4:9972200-9982200	Weak transcription	Rectal Mucosa Donor 29	rectum
24	chr4:9972200-9988200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr4:9972200-9988400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr4:9972400-9974200	Enhancers	GM12878-XiMat	blood
27	chr4:9972800-9973000	Weak transcription	HepG2	liver
28	chr4:9972800-9986800	Weak transcription	Placenta	Placenta
29	chr4:9972800-9988600	Strong transcription	Primary monocytes fromperipheralblood	blood

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