Variant report

Variant rs6839490
Chromosome Location chr4:9965000-9965001
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:9911400-9979800 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr4:9944000-9979400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr4:9949800-9979400 Weak transcription Liver Liver
4 chr4:9950000-9966600 Weak transcription Psoas Muscle Psoas
5 chr4:9958600-9984800 Weak transcription Aorta Aorta
6 chr4:9963400-9996400 Weak transcription Adipose Nuclei Adipose
7 chr4:9964000-9966000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr4:9964000-9966800 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr4:9964200-9965400 ZNF genes & repeats Primary monocytes fromperipheralblood blood
10 chr4:9964200-9965800 Enhancers GM12878-XiMat blood
11 chr4:9964200-9966000 Strong transcription NHEK skin
12 chr4:9964200-9966600 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr4:9964200-9967000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr4:9964200-9967000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr4:9964200-9968600 Strong transcription Fetal Intestine Large intestine
16 chr4:9964200-9986600 Weak transcription Ovary ovary
17 chr4:9964400-9968800 Strong transcription HMEC breast
18 chr4:9964400-9980800 Weak transcription Esophagus oesophagus
19 chr4:9964600-9965200 Genic enhancers HepG2 liver
20 chr4:9964800-9966000 Strong transcription Fetal Intestine Small intestine
21 chr4:9964800-9979200 Weak transcription Duodenum Mucosa Duodenum

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