Variant report

Variant	rs7696536
Chromosome Location	chr4:10000236-10000237
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:9999925..10002392-chr4:10005670..10008448,2	K562	blood:
2	chr4:9999663..10002309-chr4:10003898..10006601,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000250413	Chromatin interaction

Extended variants
information (count: 180 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:143)

rs_ID	r²[population]
rs10001964	0.82[JPT][hapmap]
rs10003001	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10008035	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10011206	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10030570	0.86[ASN][1000 genomes]
rs10033612	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10516198	1.00[JPT][hapmap]
rs1079128	0.82[JPT][hapmap]
rs10939636	0.83[ASN][1000 genomes]
rs1122966	0.86[ASN][1000 genomes]
rs11724510	0.82[JPT][hapmap]
rs11727087	0.82[JPT][hapmap]
rs11734209	1.00[JPT][hapmap]
rs11930388	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11936395	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11937310	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11940661	0.82[JPT][hapmap]
rs12498150	0.82[JPT][hapmap]
rs12498956	0.82[JPT][hapmap]
rs12506122	0.82[JPT][hapmap]
rs13103497	0.83[ASN][1000 genomes]
rs13110307	0.82[JPT][hapmap]
rs13115776	0.82[JPT][hapmap]
rs13125029	0.83[ASN][1000 genomes]
rs13129453	0.82[JPT][hapmap]
rs13139055	0.82[JPT][hapmap]
rs13145554	0.83[ASN][1000 genomes]
rs13146686	0.82[JPT][hapmap]
rs13328050	0.82[JPT][hapmap]
rs13435674	0.88[EUR][1000 genomes]
rs16890590	0.82[JPT][hapmap]
rs16891234	0.88[CEU][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17185835	0.82[JPT][hapmap]
rs17185870	0.82[JPT][hapmap]
rs17245436	0.82[JPT][hapmap]
rs17245723	0.82[JPT][hapmap]
rs2018643	0.82[JPT][hapmap]
rs2241464	1.00[JPT][hapmap]
rs28449404	0.86[ASN][1000 genomes]
rs28480661	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs28610447	0.83[ASN][1000 genomes]
rs35954357	0.83[ASN][1000 genomes]
rs3733587	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3775940	0.82[JPT][hapmap]
rs3775945	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3796830	0.86[ASN][1000 genomes]
rs3796833	0.86[ASN][1000 genomes]
rs3796834	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs4235347	0.82[JPT][hapmap]
rs4292327	1.00[CEU][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4292329	0.82[JPT][hapmap]
rs4311316	0.82[JPT][hapmap]
rs4312757	0.82[JPT][hapmap]
rs4314284	0.82[JPT][hapmap]
rs4447861	0.82[JPT][hapmap]
rs4455410	0.82[JPT][hapmap]
rs4459989	0.82[JPT][hapmap]
rs4459990	0.82[JPT][hapmap]
rs4473652	0.82[JPT][hapmap]
rs4473653	0.82[JPT][hapmap]
rs4476596	0.89[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4481234	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4505821	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4511996	1.00[CEU][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4515163	0.82[JPT][hapmap]
rs4519796	0.82[JPT][hapmap]
rs4533775	0.82[JPT][hapmap]
rs4543113	0.82[JPT][hapmap]
rs4547795	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4580649	0.82[JPT][hapmap]
rs4621431	0.82[JPT][hapmap]
rs55811736	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs56296130	0.83[ASN][1000 genomes]
rs57250714	0.83[ASN][1000 genomes]
rs58130873	0.83[ASN][1000 genomes]
rs59871456	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs59924619	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs60045583	0.83[ASN][1000 genomes]
rs62293333	0.89[EUR][1000 genomes]
rs62294293	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6449155	0.82[JPT][hapmap]
rs6449156	0.82[JPT][hapmap]
rs6449157	0.82[JPT][hapmap]
rs6449159	0.82[JPT][hapmap]
rs6449171	0.82[JPT][hapmap]
rs6449172	0.82[JPT][hapmap]
rs6449174	0.82[JPT][hapmap]
rs6449175	1.00[CEU][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6449178	0.82[JPT][hapmap]
rs6449179	0.82[JPT][hapmap]
rs6449202	0.82[JPT][hapmap];0.83[ASN][1000 genomes]
rs6449237	1.00[JPT][hapmap]
rs6449238	0.86[ASN][1000 genomes]
rs67820465	0.83[ASN][1000 genomes]
rs6814556	0.88[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs6814664	0.82[JPT][hapmap]
rs6815001	0.82[JPT][hapmap]
rs6815895	0.88[EUR][1000 genomes]
rs6819833	0.86[ASN][1000 genomes]
rs6820230	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs6823361	0.82[JPT][hapmap]
rs6823549	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6827754	0.82[JPT][hapmap]
rs6829727	0.82[JPT][hapmap]
rs6829755	1.00[JPT][hapmap]
rs6833878	0.92[ASN][1000 genomes]
rs6836706	0.82[JPT][hapmap]
rs6839490	0.82[JPT][hapmap]
rs6843873	0.82[JPT][hapmap]
rs6844316	0.82[JPT][hapmap]
rs6845554	0.82[JPT][hapmap]
rs6847019	0.93[CEU][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6850684	0.82[JPT][hapmap]
rs6852441	0.82[JPT][hapmap];0.83[ASN][1000 genomes]
rs6856127	0.82[JPT][hapmap]
rs6857001	0.86[ASN][1000 genomes]
rs714815	0.82[JPT][hapmap]
rs73227853	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73229818	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73229828	0.86[ASN][1000 genomes]
rs7375587	0.82[JPT][hapmap]
rs7376948	0.82[JPT][hapmap]
rs7378305	0.82[JPT][hapmap]
rs7378340	0.82[JPT][hapmap]
rs7435196	0.82[JPT][hapmap]
rs7658170	0.82[JPT][hapmap]
rs7672947	0.82[JPT][hapmap]
rs7676733	0.82[JPT][hapmap]
rs7677710	0.82[JPT][hapmap]
rs7683283	0.82[JPT][hapmap]
rs7686538	0.82[JPT][hapmap]
rs7694997	0.82[JPT][hapmap]
rs7695113	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7696895	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7697004	0.86[ASN][1000 genomes]
rs7697416	0.86[ASN][1000 genomes]
rs881971	0.82[JPT][hapmap]
rs9291645	1.00[JPT][hapmap]
rs938553	1.00[CEU][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes]
rs9992406	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9993410	0.82[JPT][hapmap]
rs9994266	0.82[JPT][hapmap]
rs9998739	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:37 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533218	chr4:9371016-10252290	Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	74 gene(s)	inside rSNPs	diseases
2	nsv530090	chr4:9383695-10165033	Enhancers Genic enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	70 gene(s)	inside rSNPs	diseases
3	nsv1014216	chr4:9713612-10223836	Transcr. at gene 5' and 3' Genic enhancers Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	53 gene(s)	inside rSNPs	diseases
4	nsv1010249	chr4:9716101-10086188	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	15 gene(s)	inside rSNPs	diseases
5	nsv878672	chr4:9786732-10008305	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
6	nsv878677	chr4:9797703-10008305	Enhancers Genic enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
7	nsv878681	chr4:9802853-10397327	Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	51 gene(s)	inside rSNPs	diseases
8	nsv997941	chr4:9805223-10493388	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	54 gene(s)	inside rSNPs	diseases
9	nsv1008649	chr4:9805223-10589802	Weak transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
10	nsv1000587	chr4:9805223-10610752	Flanking Active TSS Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
11	nsv537022	chr4:9805223-10610752	Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
12	nsv1003454	chr4:9805223-10710990	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
13	nsv537023	chr4:9805223-10710990	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
14	nsv1004801	chr4:9814720-10674528	Enhancers Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
15	nsv537024	chr4:9814720-10674528	Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
16	nsv931483	chr4:9814721-10716463	Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
17	esv2763339	chr4:9858426-10056376	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
18	nsv878686	chr4:9893403-10008305	Flanking Active TSS Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
19	nsv537026	chr4:9903566-10262258	Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	48 gene(s)	inside rSNPs	diseases
20	nsv1009972	chr4:9903566-10710990	Genic enhancers Enhancers Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
21	nsv537027	chr4:9903566-10710990	Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
22	esv2752052	chr4:9911872-10313111	Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	51 gene(s)	inside rSNPs	diseases
23	nsv878687	chr4:9912101-10008305	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
24	nsv878688	chr4:9915850-10038112	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
25	nsv1010620	chr4:9937123-10686682	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
26	nsv878689	chr4:9943185-10008305	Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
27	nsv878690	chr4:9944650-10008305	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
28	nsv530280	chr4:9947818-10940041	Enhancers Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	66 gene(s)	inside rSNPs	diseases
29	nsv532706	chr4:9948018-10451450	Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
30	nsv1013022	chr4:9961220-10230042	Active TSS Strong transcription Weak transcription Genic enhancers Enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	46 gene(s)	inside rSNPs	diseases
31	nsv537028	chr4:9961220-10230042	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	46 gene(s)	inside rSNPs	diseases
32	nsv537029	chr4:9961220-10262258	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	47 gene(s)	inside rSNPs	diseases
33	nsv878691	chr4:9966477-10418078	Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
34	nsv1013487	chr4:9972011-10320963	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
35	nsv829857	chr4:9982514-10155835	Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases
36	nsv469621	chr4:9987670-10142287	Flanking Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases
37	nsv482719	chr4:9987670-10142287	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:38 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:9977800-10003600	Weak transcription	Fetal Muscle Leg	muscle
2	chr4:9980800-10007200	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr4:9982800-10002800	Weak transcription	Gastric	stomach
4	chr4:9987600-10008000	Weak transcription	Stomach Smooth Muscle	stomach
5	chr4:9991400-10001400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr4:9991600-10007200	Weak transcription	Colon Smooth Muscle	Colon
7	chr4:9992400-10006800	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr4:9992600-10007200	Weak transcription	Skeletal Muscle Female	skeletal muscle
9	chr4:9993000-10006800	Strong transcription	Primary monocytes fromperipheralblood	blood
10	chr4:9993200-10006800	Strong transcription	Monocytes-CD14+_RO01746	blood
11	chr4:9993600-10008000	Weak transcription	Left Ventricle	heart
12	chr4:9997000-10002200	Weak transcription	Aorta	Aorta
13	chr4:9997400-10000400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
14	chr4:9997600-10007800	Genic enhancers	HepG2	liver
15	chr4:9997800-10000400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr4:9998200-10002800	Weak transcription	Liver	Liver
17	chr4:9998400-10008200	Weak transcription	Esophagus	oesophagus
18	chr4:9998400-10008400	Weak transcription	Brain Angular Gyrus	brain
19	chr4:9998400-10020400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
20	chr4:9998600-10001400	Weak transcription	HMEC	breast
21	chr4:9998600-10003000	Weak transcription	Small Intestine	intestine
22	chr4:9998600-10006800	Weak transcription	Lung	lung
23	chr4:9998800-10001200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
24	chr4:9998800-10004400	Weak transcription	Fetal Intestine Large	intestine
25	chr4:9999000-10000800	Weak transcription	NHEK	skin
26	chr4:9999000-10001000	Weak transcription	GM12878-XiMat	blood
27	chr4:9999000-10002800	Weak transcription	Stomach Mucosa	stomach
28	chr4:9999000-10003000	Weak transcription	Duodenum Mucosa	Duodenum
29	chr4:9999000-10007400	Weak transcription	Rectal Mucosa Donor 29	rectum
30	chr4:9999000-10007400	Weak transcription	Sigmoid Colon	Sigmoid Colon
31	chr4:9999200-10003200	Weak transcription	Fetal Intestine Small	intestine
32	chr4:9999200-10004400	Weak transcription	Rectal Mucosa Donor 31	rectum
33	chr4:10000000-10001800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr4:10000000-10003600	Weak transcription	Pancreas	Pancrea
35	chr4:10000200-10001600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
36	chr4:10000200-10001800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
37	chr4:10000200-10001800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr4:10000200-10002000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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