Variant report

Variant	rs13146686
Chromosome Location	chr4:10034933-10034934
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	STAT1	chr4:10034783-10035337	Hela-S3	cervix:	n/a	chr4:10035080-10035094 chr4:10035081-10035092
2	ZNF263	chr4:10034201-10035025	HEK293-T-REx	kidney:	n/a	chr4:10034715-10034736 chr4:10034673-10034682
3	STAT3	chr4:10034848-10035200	MCF10A-Er-Src	breast:	n/a	chr4:10035080-10035094 chr4:10034982-10034993
4	RCOR1	chr4:10034801-10035370	K562	blood:	n/a	n/a
5	KAP1	chr4:10034373-10034969	U2OS	brain:	n/a	n/a
6	FOS	chr4:10034268-10035118	MCF10A-Er-Src	breast:	n/a	n/a
7	MYC	chr4:10034315-10035235	MCF10A-Er-Src	breast:	n/a	chr4:10035022-10035032
8	JUND	chr4:10034334-10035215	K562	blood:	n/a	chr4:10034524-10034535
9	MAX	chr4:10034263-10035134	A549	lung:	n/a	chr4:10035022-10035032
10	CTCF	chr4:10034840-10034990	HCPEpiC	choroid plexus:	n/a	n/a
11	POLR2A	chr4:10034371-10035186	PFSK-1	brain:	n/a	n/a
12	STAT3	chr4:10034257-10035342	MCF10A-Er-Src	breast:	n/a	chr4:10035080-10035094 chr4:10034982-10034993
13	FOS	chr4:10034261-10035240	MCF10A-Er-Src	breast:	n/a	n/a
14	FOS	chr4:10034268-10035198	MCF10A-Er-Src	breast:	n/a	n/a
15	FOS	chr4:10034246-10035176	MCF10A-Er-Src	breast:	n/a	n/a
16	TBL1XR1	chr4:10034886-10035214	K562	blood:	n/a	n/a
17	MYC	chr4:10034910-10035290	K562	blood:	n/a	chr4:10035022-10035032
18	MAX	chr4:10034784-10035134	A549	lung:	n/a	chr4:10035022-10035032
19	POLR2A	chr4:10034589-10035340	PFSK-1	brain:	n/a	n/a
20	UBTF	chr4:10034847-10035199	K562	blood:	n/a	n/a
21	STAT3	chr4:10034257-10035422	MCF10A-Er-Src	breast:	n/a	chr4:10035080-10035094 chr4:10035369-10035381 chr4:10034982-10034993
22	CEBPB	chr4:10034309-10035022	IMR90	lung:	n/a	n/a
23	TEAD4	chr4:10034694-10035284	K562	blood:	n/a	n/a
24	STAT3	chr4:10034239-10035448	MCF10A-Er-Src	breast:	n/a	chr4:10035080-10035094 chr4:10035369-10035381 chr4:10034982-10034993
25	EP300	chr4:10034821-10035202	K562	blood:	n/a	n/a
26	FOS	chr4:10034358-10035073	HUVEC	blood vessel:	n/a	n/a
27	MYC	chr4:10034309-10034936	NB4	blood:	n/a	n/a
28	MYC	chr4:10034789-10035182	K562	blood:	n/a	chr4:10035022-10035032

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:10020627..10022375-chr4:10032476..10035233,2	K562	blood:

Variant related genes	Relation type
SLC2A9	TF binding region
ENSG00000109667	Chromatin interaction

Extended variants
information (count: 173 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:138)

rs_ID	r²[population]
rs10001964	1.00[JPT][hapmap]
rs10003001	0.82[JPT][hapmap]
rs10008035	0.82[JPT][hapmap]
rs10011206	0.82[JPT][hapmap]
rs10018204	1.00[JPT][hapmap]
rs10033612	0.82[JPT][hapmap]
rs10516198	0.86[CHB][hapmap];0.82[JPT][hapmap]
rs1079128	1.00[JPT][hapmap]
rs10939665	0.82[CEU][hapmap]
rs10939669	0.82[CEU][hapmap]
rs10939671	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10939672	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11722930	0.82[CEU][hapmap]
rs11724510	1.00[JPT][hapmap]
rs11727087	0.85[CEU][hapmap];0.90[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.84[TSI][hapmap];0.90[EUR][1000 genomes]
rs11727199	0.81[CEU][hapmap]
rs11731110	0.82[CEU][hapmap]
rs11734209	0.82[JPT][hapmap]
rs12498150	1.00[JPT][hapmap]
rs12498956	1.00[JPT][hapmap]
rs12500805	0.82[AMR][1000 genomes]
rs12504565	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12506122	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12506455	0.82[CEU][hapmap]
rs12508991	0.82[CEU][hapmap]
rs12647168	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs13101785	0.82[CEU][hapmap]
rs13103497	0.88[CHB][hapmap]
rs13110307	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13115776	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13120348	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13122689	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13124007	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13125029	1.00[JPT][hapmap]
rs13129453	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13137343	0.82[CEU][hapmap]
rs13139055	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13144709	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13328050	1.00[JPT][hapmap]
rs16891234	0.82[JPT][hapmap]
rs17185835	1.00[JPT][hapmap]
rs17185870	1.00[JPT][hapmap]
rs17245436	1.00[JPT][hapmap]
rs17245723	1.00[JPT][hapmap]
rs2018643	1.00[JPT][hapmap]
rs3733585	0.82[CEU][hapmap]
rs3733587	0.82[JPT][hapmap]
rs3775940	0.89[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3796834	0.86[CHB][hapmap];0.82[JPT][hapmap]
rs3796837	0.89[ASN][1000 genomes]
rs3822241	0.90[EUR][1000 genomes]
rs3822247	0.86[EUR][1000 genomes]
rs4235347	1.00[JPT][hapmap]
rs4292327	0.82[JPT][hapmap]
rs4311316	1.00[JPT][hapmap]
rs4312757	1.00[JPT][hapmap]
rs4314284	1.00[JPT][hapmap]
rs4318649	0.89[ASN][1000 genomes]
rs4318650	0.89[ASN][1000 genomes]
rs4339211	1.00[JPT][hapmap]
rs4447861	1.00[JPT][hapmap]
rs4455410	1.00[JPT][hapmap]
rs4459990	1.00[JPT][hapmap]
rs4473653	1.00[JPT][hapmap]
rs4476596	0.82[JPT][hapmap]
rs4505821	0.82[JPT][hapmap]
rs4511996	0.82[JPT][hapmap]
rs4515163	1.00[JPT][hapmap]
rs4519796	1.00[JPT][hapmap]
rs4529049	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4543113	0.88[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.88[TSI][hapmap];0.82[ASN][1000 genomes]
rs4547795	0.82[JPT][hapmap]
rs4560411	0.82[JPT][hapmap]
rs4580649	1.00[JPT][hapmap]
rs4621431	1.00[JPT][hapmap]
rs4697914	1.00[JPT][hapmap]
rs6449155	1.00[JPT][hapmap]
rs6449156	1.00[JPT][hapmap]
rs6449157	1.00[JPT][hapmap]
rs6449159	1.00[JPT][hapmap]
rs6449171	1.00[JPT][hapmap]
rs6449172	1.00[JPT][hapmap]
rs6449174	1.00[JPT][hapmap]
rs6449175	0.82[JPT][hapmap]
rs6449176	1.00[JPT][hapmap]
rs6449178	1.00[JPT][hapmap]
rs6449179	1.00[JPT][hapmap]
rs6449201	1.00[JPT][hapmap]
rs6449202	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs6449217	0.82[ASN][1000 genomes]
rs6449237	0.86[CHB][hapmap];0.82[JPT][hapmap]
rs6814556	0.82[JPT][hapmap]
rs6814664	1.00[JPT][hapmap]
rs6815001	1.00[JPT][hapmap]
rs6820188	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6820230	0.86[CHB][hapmap];0.82[JPT][hapmap]
rs6823361	1.00[JPT][hapmap]
rs6827754	0.85[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[ASN][1000 genomes]
rs6827785	0.89[ASN][1000 genomes]
rs6829727	0.93[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6829755	0.82[JPT][hapmap]
rs6834893	1.00[JPT][hapmap]
rs6836706	1.00[JPT][hapmap]
rs6839490	1.00[JPT][hapmap]
rs6843873	1.00[JPT][hapmap]
rs6844316	1.00[JPT][hapmap]
rs6845554	0.84[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.89[ASN][1000 genomes]
rs6849273	0.89[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6849729	1.00[JPT][hapmap]
rs6850166	0.83[ASN][1000 genomes]
rs6850684	1.00[JPT][hapmap]
rs6852441	1.00[JPT][hapmap]
rs6856127	1.00[JPT][hapmap]
rs73212848	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73229842	0.85[ASN][1000 genomes]
rs7375587	1.00[JPT][hapmap]
rs7376948	1.00[JPT][hapmap]
rs7378305	1.00[JPT][hapmap]
rs7378340	1.00[JPT][hapmap]
rs7435196	1.00[JPT][hapmap]
rs7442336	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7658170	1.00[JPT][hapmap]
rs7672947	1.00[JPT][hapmap]
rs7676733	1.00[JPT][hapmap]
rs7677710	1.00[JPT][hapmap]
rs7679916	0.82[CEU][hapmap]
rs7683283	1.00[JPT][hapmap]
rs7686538	1.00[JPT][hapmap]
rs7694997	1.00[JPT][hapmap]
rs7696536	0.82[JPT][hapmap]
rs7696895	0.82[JPT][hapmap]
rs881971	0.81[CHD][hapmap];1.00[JPT][hapmap]
rs9291645	0.86[CHB][hapmap];0.82[JPT][hapmap];0.82[YRI][hapmap];0.85[ASN][1000 genomes]
rs938553	0.82[JPT][hapmap]
rs9992406	0.82[JPT][hapmap]
rs9993410	1.00[JPT][hapmap]
rs9994266	1.00[JPT][hapmap]
rs9998739	0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:35 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533218	chr4:9371016-10252290	Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	74 gene(s)	inside rSNPs	diseases
2	nsv530090	chr4:9383695-10165033	Enhancers Genic enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	70 gene(s)	inside rSNPs	diseases
3	nsv1014216	chr4:9713612-10223836	Transcr. at gene 5' and 3' Genic enhancers Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	53 gene(s)	inside rSNPs	diseases
4	nsv1010249	chr4:9716101-10086188	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	15 gene(s)	inside rSNPs	diseases
5	nsv878681	chr4:9802853-10397327	Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	51 gene(s)	inside rSNPs	diseases
6	nsv997941	chr4:9805223-10493388	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	54 gene(s)	inside rSNPs	diseases
7	nsv1008649	chr4:9805223-10589802	Weak transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
8	nsv1000587	chr4:9805223-10610752	Flanking Active TSS Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
9	nsv537022	chr4:9805223-10610752	Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	56 gene(s)	inside rSNPs	diseases
10	nsv1003454	chr4:9805223-10710990	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
11	nsv537023	chr4:9805223-10710990	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
12	nsv1004801	chr4:9814720-10674528	Enhancers Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
13	nsv537024	chr4:9814720-10674528	Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
14	nsv931483	chr4:9814721-10716463	Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
15	esv2763339	chr4:9858426-10056376	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
16	nsv537026	chr4:9903566-10262258	Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	48 gene(s)	inside rSNPs	diseases
17	nsv1009972	chr4:9903566-10710990	Genic enhancers Enhancers Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
18	nsv537027	chr4:9903566-10710990	Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	58 gene(s)	inside rSNPs	diseases
19	esv2752052	chr4:9911872-10313111	Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	51 gene(s)	inside rSNPs	diseases
20	nsv878688	chr4:9915850-10038112	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
21	nsv1010620	chr4:9937123-10686682	Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	57 gene(s)	inside rSNPs	diseases
22	nsv530280	chr4:9947818-10940041	Enhancers Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	66 gene(s)	inside rSNPs	diseases
23	nsv532706	chr4:9948018-10451450	Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
24	nsv1013022	chr4:9961220-10230042	Active TSS Strong transcription Weak transcription Genic enhancers Enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	46 gene(s)	inside rSNPs	diseases
25	nsv537028	chr4:9961220-10230042	Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	46 gene(s)	inside rSNPs	diseases
26	nsv537029	chr4:9961220-10262258	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	47 gene(s)	inside rSNPs	diseases
27	nsv878691	chr4:9966477-10418078	Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
28	nsv1013487	chr4:9972011-10320963	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
29	nsv829857	chr4:9982514-10155835	Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases
30	nsv469621	chr4:9987670-10142287	Flanking Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases
31	nsv482719	chr4:9987670-10142287	Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases
32	nsv1008067	chr4:10004664-10262258	Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	47 gene(s)	inside rSNPs	diseases
33	nsv537030	chr4:10004664-10262258	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	47 gene(s)	inside rSNPs	diseases
34	nsv593691	chr4:10013173-10050141	Bivalent Enhancer Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
35	nsv869057	chr4:10013411-10875454	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	65 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:84 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:10021600-10035200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr4:10031800-10037200	Enhancers	Fetal Muscle Leg	muscle
3	chr4:10032200-10035200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr4:10032200-10035400	Enhancers	Right Ventricle	heart
5	chr4:10032200-10036000	Enhancers	Psoas Muscle	Psoas
6	chr4:10032400-10035200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr4:10032400-10035400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr4:10032400-10035800	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr4:10032400-10036000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr4:10032400-10036200	Enhancers	Right Atrium	heart
11	chr4:10032400-10036400	Enhancers	Brain Angular Gyrus	brain
12	chr4:10032400-10036400	Enhancers	Left Ventricle	heart
13	chr4:10032400-10037000	Enhancers	Fetal Muscle Trunk	muscle
14	chr4:10032400-10037000	Enhancers	Placenta	Placenta
15	chr4:10032400-10037000	Enhancers	Fetal Stomach	stomach
16	chr4:10032600-10036200	Enhancers	Osteobl	bone
17	chr4:10032800-10035200	Enhancers	Fetal Kidney	kidney
18	chr4:10032800-10035400	Enhancers	Fetal Intestine Small	intestine
19	chr4:10032800-10035600	Enhancers	Adipose Nuclei	Adipose
20	chr4:10033000-10035200	Enhancers	HUES48 Cell Line	embryonic stem cell
21	chr4:10033000-10036200	Enhancers	Lung	lung
22	chr4:10033000-10037000	Enhancers	Breast Myoepithelial Primary Cells	Breast
23	chr4:10033200-10035400	Enhancers	Stomach Smooth Muscle	stomach
24	chr4:10033200-10035400	Enhancers	Spleen	Spleen
25	chr4:10033200-10036200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr4:10033200-10036800	Enhancers	Skeletal Muscle Female	skeletal muscle
27	chr4:10033400-10035400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr4:10033400-10035800	Enhancers	Esophagus	oesophagus
29	chr4:10033400-10036200	Enhancers	Ovary	ovary
30	chr4:10033400-10036400	Enhancers	NHLF	lung
31	chr4:10033400-10036800	Enhancers	Duodenum Mucosa	Duodenum
32	chr4:10033600-10035000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr4:10033600-10035000	Weak transcription	Brain Inferior Temporal Lobe	brain
34	chr4:10033600-10035200	Enhancers	HUVEC	blood vessel
35	chr4:10033600-10036000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
36	chr4:10033600-10036200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
37	chr4:10033600-10036400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
38	chr4:10033600-10036400	Enhancers	HMEC	breast
39	chr4:10033600-10037800	Enhancers	HepG2	liver
40	chr4:10033800-10035400	Enhancers	Rectal Mucosa Donor 31	rectum
41	chr4:10033800-10035600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr4:10033800-10036000	Weak transcription	Brain Anterior Caudate	brain
43	chr4:10033800-10036200	Weak transcription	Brain Cingulate Gyrus	brain
44	chr4:10033800-10037400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr4:10034000-10035000	Enhancers	Liver	Liver
46	chr4:10034000-10035000	Enhancers	Stomach Mucosa	stomach
47	chr4:10034000-10035400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
48	chr4:10034000-10035600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
49	chr4:10034000-10035600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
50	chr4:10034000-10035600	Enhancers	Small Intestine	intestine

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