The 2.0 version of rSNPBase

Variant report

Variant rs1265174
Chromosome Location chr1:95404135-95404136
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95394000-95415600 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr1:95395400-95410400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:95395600-95404200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:95395600-95407000 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr1:95395600-95412400 Weak transcription Colonic Mucosa Colon
6 chr1:95395600-95412400 Weak transcription Pancreas Pancrea
7 chr1:95395600-95416400 Weak transcription Brain Hippocampus Middle brain
8 chr1:95395800-95408600 Weak transcription Brain Cingulate Gyrus brain
9 chr1:95396000-95407800 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr1:95399400-95412200 Weak transcription Stomach Smooth Muscle stomach
11 chr1:95399400-95412400 Weak transcription Fetal Stomach stomach
12 chr1:95399400-95415400 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr1:95399400-95418800 Weak transcription Ovary ovary
14 chr1:95400200-95404400 Enhancers Muscle Satellite Cultured Cells --
15 chr1:95400400-95404200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
16 chr1:95400400-95405000 Enhancers Hela-S3 cervix
17 chr1:95400600-95404400 Enhancers NH-A brain
18 chr1:95400600-95404400 Enhancers Osteobl bone
19 chr1:95400600-95405200 Enhancers A549 lung
20 chr1:95401200-95404200 Enhancers ES-I3 Cell Line embryonic stem cell
21 chr1:95401200-95404200 Enhancers HSMMtube muscle
22 chr1:95401400-95404200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:95401400-95404200 Enhancers Placenta Amnion Placenta Amnion
24 chr1:95401800-95404200 Enhancers iPS-20b Cell Line embryonic stem cell
25 chr1:95401800-95404200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:95401800-95404200 Enhancers Rectal Smooth Muscle rectum
27 chr1:95401800-95404200 Enhancers NHLF lung
28 chr1:95401800-95405000 Enhancers HSMM muscle
29 chr1:95401800-95405000 Enhancers NHDF-Ad bronchial
30 chr1:95401800-95405200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:95401800-95405400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:95402000-95405200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr1:95402200-95406000 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr1:95402400-95419400 Weak transcription H9 Cell Line embryonic stem cell
35 chr1:95402600-95404200 Enhancers Duodenum Mucosa Duodenum
36 chr1:95402600-95404800 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr1:95402600-95412400 Weak transcription Stomach Mucosa stomach
38 chr1:95402600-95412600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:95402800-95407600 Weak transcription HepG2 liver
40 chr1:95402800-95412200 Weak transcription Fetal Heart heart
41 chr1:95402800-95415400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:95403000-95406200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:95403000-95406800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr1:95403000-95408600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr1:95403200-95405800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:95403400-95404200 Enhancers Right Atrium heart
47 chr1:95403400-95405200 Weak transcription Fetal Kidney kidney
48 chr1:95403400-95406400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:95403600-95405200 Enhancers Colon Smooth Muscle Colon
50 chr1:95403600-95405400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015