Variant report

Variant rs12775017
Chromosome Location chr10:89565088-89565089
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:89473000-89577200 Weak transcription Gastric stomach
2 chr10:89495000-89576400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr10:89495200-89577400 Weak transcription Spleen Spleen
4 chr10:89511000-89576800 Weak transcription Colonic Mucosa Colon
5 chr10:89513400-89577000 Weak transcription Placenta Amnion Placenta Amnion
6 chr10:89520600-89575600 Weak transcription Stomach Mucosa stomach
7 chr10:89527400-89575000 Weak transcription Brain Inferior Temporal Lobe brain
8 chr10:89530800-89575800 Weak transcription Brain Cingulate Gyrus brain
9 chr10:89536200-89574600 Weak transcription Brain Anterior Caudate brain
10 chr10:89537000-89576400 Weak transcription HSMMtube muscle
11 chr10:89541800-89575000 Weak transcription Right Ventricle heart
12 chr10:89542000-89571200 Weak transcription Brain Hippocampus Middle brain
13 chr10:89543000-89571400 Weak transcription Rectal Smooth Muscle rectum
14 chr10:89543200-89572200 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr10:89543400-89577200 Weak transcription Aorta Aorta
16 chr10:89548200-89574800 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr10:89549400-89575400 Weak transcription Brain Angular Gyrus brain
18 chr10:89550000-89572200 Weak transcription HUVEC blood vessel
19 chr10:89552600-89566200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr10:89552800-89571400 Weak transcription NHEK skin
21 chr10:89553000-89570000 Weak transcription HMEC breast
22 chr10:89553200-89565800 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr10:89553200-89569800 Weak transcription Stomach Smooth Muscle stomach
24 chr10:89554400-89570800 Weak transcription Esophagus oesophagus
25 chr10:89554400-89577200 Weak transcription Pancreas Pancrea
26 chr10:89556200-89573800 Strong transcription HSMM muscle
27 chr10:89556400-89565800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr10:89556600-89569200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr10:89557000-89575000 Weak transcription Adipose Nuclei Adipose
30 chr10:89557000-89575800 Weak transcription NH-A brain
31 chr10:89557600-89567000 Weak transcription Placenta Placenta
32 chr10:89557800-89567200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr10:89558000-89569200 Weak transcription Fetal Stomach stomach
34 chr10:89558000-89573400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr10:89558200-89565200 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr10:89558800-89565200 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
37 chr10:89558800-89570400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr10:89559000-89565800 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
39 chr10:89559200-89565200 ZNF genes & repeats H1 Cell Line embryonic stem cell
40 chr10:89559200-89565400 ZNF genes & repeats Dnd41 blood
41 chr10:89559200-89569400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr10:89560000-89569400 ZNF genes & repeats Primary hematopoietic stem cells blood
43 chr10:89560200-89567200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr10:89560200-89569400 Weak transcription NHDF-Ad bronchial
45 chr10:89560600-89575000 Weak transcription Small Intestine intestine
46 chr10:89560800-89575600 Weak transcription Fetal Brain Male brain
47 chr10:89561600-89571400 Weak transcription Osteobl bone
48 chr10:89561600-89576600 Weak transcription Fetal Kidney kidney
49 chr10:89561800-89570600 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr10:89561800-89576200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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