Variant report

Variant	rs12782477
Chromosome Location	chr10:117310127-117310128
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 62 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:62)

rs_ID	r²[population]
rs10509993	0.92[CHB][hapmap]
rs10510010	0.88[JPT][hapmap]
rs10787571	0.92[CHB][hapmap]
rs10787572	0.92[CHB][hapmap]
rs10885719	0.92[CHB][hapmap]
rs11592415	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs11593278	0.92[CHB][hapmap]
rs11593829	0.85[CEU][hapmap];1.00[CHB][hapmap]
rs11593878	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs11594315	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs11595244	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs11595630	0.92[CHB][hapmap]
rs11598455	0.86[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs1170884	0.92[CHB][hapmap]
rs12766497	0.83[CEU][hapmap];0.89[CHB][hapmap]
rs12769284	0.84[CEU][hapmap];0.92[CHB][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12770375	0.85[CEU][hapmap];0.86[JPT][hapmap]
rs12772971	0.84[CEU][hapmap];0.92[CHB][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12774040	0.84[CEU][hapmap];0.88[JPT][hapmap]
rs12775300	0.82[ASN][1000 genomes]
rs12776022	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs12781613	0.92[CHB][hapmap]
rs12783715	0.83[CEU][hapmap];0.92[CHB][hapmap]
rs12784624	0.84[CEU][hapmap];0.92[CHB][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1414632	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1565832	0.92[CHB][hapmap]
rs17093112	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs17723399	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs17724010	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs17724028	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs17724768	0.90[CHB][hapmap]
rs17802247	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs17803175	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs17803797	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs17803963	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs1953601	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs1953602	0.84[CEU][hapmap];0.82[CHB][hapmap]
rs2184706	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs34421131	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34733774	1.00[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs35031734	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs35104556	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35493012	1.00[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs35717629	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35742449	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36093626	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4364974	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs4582885	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs5004584	0.92[CHB][hapmap]
rs587603	0.84[CHB][hapmap]
rs589508	0.92[CHB][hapmap]
rs593796	0.92[CHB][hapmap]
rs61880985	0.92[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs61881037	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs633656	0.92[CHB][hapmap]
rs653295	0.92[CHB][hapmap]
rs659351	0.92[CHB][hapmap]
rs677575	0.92[CHB][hapmap]
rs7077286	0.92[CHB][hapmap]
rs7078695	0.92[CHB][hapmap]
rs7100684	0.84[CEU][hapmap];0.92[CHB][hapmap];0.87[ASN][1000 genomes]
rs7476255	0.92[CHB][hapmap];1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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