Variant report

Variant	rs17803963
Chromosome Location	chr10:117367024-117367025
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 61 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs10509993	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10510010	0.86[CEU][hapmap];0.90[JPT][hapmap]
rs10787571	0.85[CHB][hapmap]
rs10787572	0.85[CHB][hapmap]
rs10885717	0.84[JPT][hapmap]
rs10885719	0.85[CHB][hapmap]
rs11197361	0.85[CEU][hapmap]
rs11197362	0.86[CEU][hapmap]
rs11197365	0.82[CEU][hapmap]
rs11197376	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11197385	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11592415	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap]
rs11593278	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11593829	0.86[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap]
rs11593878	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap]
rs11594315	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap]
rs11595244	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11595630	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12219110	0.80[CEU][hapmap]
rs12219313	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12220978	0.85[CEU][hapmap];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12766032	0.85[CEU][hapmap];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12766497	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12766984	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12769284	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12770375	0.86[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap]
rs12770825	0.86[CEU][hapmap]
rs12772971	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12774040	1.00[CEU][hapmap];0.90[JPT][hapmap]
rs12776022	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12777776	0.86[CEU][hapmap];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12781613	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12782477	0.84[CEU][hapmap];0.92[CHB][hapmap]
rs12783715	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12784215	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12784624	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1414632	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap]
rs1414636	0.95[CEU][hapmap]
rs17093112	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17723399	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17724010	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17724028	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17724768	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17802247	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17803175	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17803797	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1953601	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1953602	1.00[CEU][hapmap];0.92[CHB][hapmap];0.90[JPT][hapmap]
rs2184706	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2255846	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36114529	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4364974	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4582885	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs56132379	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61881120	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs633656	0.83[CHB][hapmap]
rs653295	0.85[CHB][hapmap]
rs659351	0.85[CHB][hapmap]
rs7077286	0.85[CHB][hapmap]
rs7100684	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7476255	1.00[CHB][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117365400-117367400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr10:117366800-117368400	Weak transcription	HSMM	muscle

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