Variant report

Variant rs12789704
Chromosome Location chr11:33180858-33180859
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:33124000-33181800 Weak transcription Esophagus oesophagus
2 chr11:33155200-33181200 Weak transcription Lung lung
3 chr11:33156200-33181200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr11:33157600-33181600 Weak transcription Placenta Amnion Placenta Amnion
5 chr11:33158200-33181600 Weak transcription HSMMtube muscle
6 chr11:33160400-33181200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr11:33164600-33181400 Weak transcription Brain Cingulate Gyrus brain
8 chr11:33164600-33181400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr11:33166600-33181200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr11:33170000-33181200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr11:33174000-33181400 Weak transcription Fetal Stomach stomach
12 chr11:33177200-33181000 Enhancers Primary T helper 17 cells PMA-I stimulated --
13 chr11:33177200-33181200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr11:33177400-33181400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr11:33177800-33181200 Weak transcription Brain Angular Gyrus brain
16 chr11:33178000-33181200 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr11:33178000-33181400 Weak transcription Primary hematopoietic stem cells blood
18 chr11:33178000-33184800 Active TSS GM12878-XiMat blood
19 chr11:33178200-33181400 Enhancers Primary T helper naive cells fromperipheralblood blood
20 chr11:33179000-33181200 Enhancers Primary T cells from cord blood blood
21 chr11:33179200-33181200 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr11:33179200-33181200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr11:33179200-33181400 Enhancers Osteobl bone
24 chr11:33179200-33181800 Enhancers Primary monocytes fromperipheralblood blood
25 chr11:33179400-33181200 Enhancers NHDF-Ad bronchial
26 chr11:33179400-33181400 Enhancers Colon Smooth Muscle Colon
27 chr11:33179400-33181600 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr11:33179400-33181600 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr11:33179400-33181600 Enhancers Primary T killer memory cells from peripheral blood blood
30 chr11:33179600-33181200 Enhancers Fetal Lung lung
31 chr11:33179600-33181400 Transcr. at gene 5' and 3' H9 Derived Neuron Cultured Cells ES cell derived
32 chr11:33179800-33181000 Flanking Active TSS Hela-S3 cervix
33 chr11:33179800-33181200 Enhancers Brain Anterior Caudate brain
34 chr11:33179800-33181400 Enhancers Primary T helper cells fromperipheralblood blood
35 chr11:33179800-33181400 Enhancers Brain Inferior Temporal Lobe brain
36 chr11:33179800-33181400 Enhancers Fetal Heart heart
37 chr11:33179800-33181400 Enhancers Monocytes-CD14+_RO01746 blood
38 chr11:33179800-33181600 Enhancers Fetal Brain Male brain
39 chr11:33180000-33181000 Enhancers Rectal Mucosa Donor 29 rectum
40 chr11:33180000-33181000 Genic enhancers HSMM muscle
41 chr11:33180000-33181200 Enhancers NHLF lung
42 chr11:33180000-33181400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr11:33180000-33181400 Enhancers Cortex derived primary cultured neurospheres brain
44 chr11:33180000-33181600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
45 chr11:33180000-33183600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr11:33180000-33183600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr11:33180200-33181000 Flanking Active TSS Muscle Satellite Cultured Cells --
48 chr11:33180200-33181000 Flanking Active TSS K562 blood
49 chr11:33180200-33181200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
50 chr11:33180200-33181200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

Quick Search:


  
Input of quick search could be:

what's new

Quick links