The 2.0 version of rSNPBase

Variant report

Variant rs1282958
Chromosome Location chr3:111626487-111626488
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111591600-111633200 Weak transcription Fetal Kidney kidney
2 chr3:111604000-111632200 Weak transcription Gastric stomach
3 chr3:111604400-111629400 Weak transcription Ovary ovary
4 chr3:111604400-111632200 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr3:111604800-111632000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr3:111605000-111629800 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr3:111610200-111627400 Weak transcription Aorta Aorta
8 chr3:111617600-111631800 Weak transcription H9 Cell Line embryonic stem cell
9 chr3:111618200-111628800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr3:111620000-111643200 Weak transcription Esophagus oesophagus
11 chr3:111620600-111626800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
12 chr3:111621800-111632200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr3:111622400-111630400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr3:111622400-111630400 Weak transcription Pancreas Pancrea
15 chr3:111622600-111628400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr3:111622800-111630200 Weak transcription Fetal Intestine Small intestine
17 chr3:111623400-111641200 Weak transcription Lung lung
18 chr3:111623600-111626600 Weak transcription Right Ventricle heart
19 chr3:111623600-111626800 Weak transcription Placenta Amnion Placenta Amnion
20 chr3:111623600-111629800 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr3:111623800-111628800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr3:111623800-111629200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr3:111623800-111629200 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr3:111623800-111640200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr3:111624000-111627200 Weak transcription Stomach Smooth Muscle stomach
26 chr3:111624000-111628400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr3:111624000-111628400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr3:111624000-111629400 Weak transcription Colon Smooth Muscle Colon
29 chr3:111624200-111627000 Weak transcription Fetal Muscle Trunk muscle
30 chr3:111624200-111627400 Weak transcription Muscle Satellite Cultured Cells --
31 chr3:111624200-111627400 Weak transcription NH-A brain
32 chr3:111624200-111628800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr3:111624200-111629200 Weak transcription NHDF-Ad bronchial
34 chr3:111624200-111629400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr3:111624200-111629400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr3:111624200-111629600 Weak transcription Fetal Brain Male brain
37 chr3:111624600-111628600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr3:111624600-111629400 Weak transcription Rectal Smooth Muscle rectum
39 chr3:111624600-111632800 Enhancers Fetal Heart heart
40 chr3:111624600-111643200 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr3:111624800-111629000 Strong transcription Placenta Placenta
42 chr3:111625400-111627600 Genic enhancers Adipose Nuclei Adipose
43 chr3:111625400-111628400 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr3:111625600-111626600 Weak transcription HSMM muscle
45 chr3:111625600-111628600 Strong transcription NHEK skin
46 chr3:111625600-111628600 Strong transcription Osteobl bone
47 chr3:111625600-111628800 Weak transcription HUVEC blood vessel
48 chr3:111625800-111630200 Weak transcription Right Atrium heart
49 chr3:111626000-111626800 Weak transcription HMEC breast
50 chr3:111626000-111629200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015