The 2.0 version of rSNPBase

Variant report

Variant rs1283010
Chromosome Location chr3:111598593-111598594
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111584600-111603400 Weak transcription Fetal Intestine Large intestine
2 chr3:111585200-111622000 Weak transcription HSMMtube muscle
3 chr3:111585400-111603400 Weak transcription Spleen Spleen
4 chr3:111585400-111609000 Weak transcription Esophagus oesophagus
5 chr3:111587200-111603000 Weak transcription Placenta Placenta
6 chr3:111587800-111599200 Weak transcription Liver Liver
7 chr3:111589200-111603400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr3:111589800-111603400 Weak transcription Pancreas Pancrea
9 chr3:111591600-111603200 Weak transcription Ovary ovary
10 chr3:111591600-111603600 Weak transcription HepG2 liver
11 chr3:111591600-111610600 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr3:111591600-111633200 Weak transcription Fetal Kidney kidney
13 chr3:111593400-111599600 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr3:111593400-111601400 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr3:111593600-111598800 Weak transcription Aorta Aorta
16 chr3:111593600-111599000 Weak transcription Left Ventricle heart
17 chr3:111593600-111599200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr3:111593600-111601400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr3:111593600-111603000 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr3:111593600-111603000 Weak transcription Lung lung
21 chr3:111593600-111603200 Weak transcription Gastric stomach
22 chr3:111593600-111603400 Weak transcription HSMM muscle
23 chr3:111593600-111608800 Weak transcription Rectal Smooth Muscle rectum
24 chr3:111593800-111598800 Weak transcription Hela-S3 cervix
25 chr3:111593800-111599000 Weak transcription A549 lung
26 chr3:111593800-111599000 Weak transcription NH-A brain
27 chr3:111593800-111599200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr3:111593800-111601200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr3:111593800-111602000 Weak transcription HUVEC blood vessel
30 chr3:111593800-111602800 Weak transcription NHLF lung
31 chr3:111593800-111603000 Weak transcription Fetal Stomach stomach
32 chr3:111593800-111603200 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr3:111593800-111603400 Weak transcription Placenta Amnion Placenta Amnion
34 chr3:111594000-111598600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr3:111594000-111603400 Weak transcription Muscle Satellite Cultured Cells --
36 chr3:111594400-111603200 Weak transcription HMEC breast
37 chr3:111595200-111601200 Weak transcription NHEK skin
38 chr3:111595400-111601200 Weak transcription Osteobl bone
39 chr3:111595400-111602600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr3:111595800-111599000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr3:111598200-111599600 Enhancers Adipose Nuclei Adipose
42 chr3:111598200-111600400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr3:111598400-111598600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
44 chr3:111598400-111598800 Weak transcription Right Ventricle heart
45 chr3:111598400-111599200 Enhancers Right Atrium heart
46 chr3:111598400-111612600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015