Variant report
| Variant | rs12948207 |
|---|---|
| Chromosome Location | chr17:46053353-46053354 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr17:46049000-46055200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 2 | chr17:46049000-46056000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 3 | chr17:46049600-46056200 | Weak transcription | Psoas Muscle | Psoas |
| 4 | chr17:46049600-46059600 | Weak transcription | Fetal Heart | heart |
| 5 | chr17:46049800-46058200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 6 | chr17:46049800-46066600 | Weak transcription | Small Intestine | intestine |
| 7 | chr17:46050000-46054800 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 8 | chr17:46050000-46055800 | Weak transcription | Fetal Brain Male | brain |
| 9 | chr17:46050000-46056200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 10 | chr17:46050200-46054800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 11 | chr17:46050200-46056000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr17:46050200-46056000 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 13 | chr17:46050200-46060400 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 14 | chr17:46050200-46060400 | Strong transcription | Osteobl | bone |
| 15 | chr17:46050200-46061800 | Strong transcription | NHLF | lung |
| 16 | chr17:46050200-46062000 | Strong transcription | NHEK | skin |
| 17 | chr17:46050200-46062200 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 18 | chr17:46050200-46062800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 19 | chr17:46050200-46063000 | Strong transcription | Fetal Muscle Trunk | muscle |
| 20 | chr17:46050200-46063400 | Strong transcription | Fetal Stomach | stomach |
| 21 | chr17:46050400-46053600 | Strong transcription | K562 | blood |
| 22 | chr17:46050400-46056800 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 23 | chr17:46050400-46058000 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 24 | chr17:46050400-46060800 | Strong transcription | Ovary | ovary |
| 25 | chr17:46050400-46061000 | Strong transcription | A549 | lung |
| 26 | chr17:46050400-46061200 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 27 | chr17:46050400-46061400 | Strong transcription | HepG2 | liver |
| 28 | chr17:46050400-46062000 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 29 | chr17:46050400-46062200 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 30 | chr17:46050400-46063000 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 31 | chr17:46050600-46056000 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 32 | chr17:46050600-46056000 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 33 | chr17:46050600-46056200 | Strong transcription | Duodenum Mucosa | Duodenum |
| 34 | chr17:46050600-46057000 | Strong transcription | Dnd41 | blood |
| 35 | chr17:46050600-46058000 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 36 | chr17:46050600-46061800 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 37 | chr17:46050600-46062200 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 38 | chr17:46050600-46062200 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 39 | chr17:46050800-46053400 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 40 | chr17:46050800-46053600 | Strong transcription | HMEC | breast |
| 41 | chr17:46050800-46053800 | Strong transcription | Pancreas | Pancrea |
| 42 | chr17:46050800-46055400 | Strong transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 43 | chr17:46050800-46056000 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 44 | chr17:46050800-46056000 | Strong transcription | GM12878-XiMat | blood |
| 45 | chr17:46050800-46057200 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 46 | chr17:46050800-46057800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 47 | chr17:46050800-46057800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 48 | chr17:46050800-46058000 | Strong transcription | Brain Cingulate Gyrus | brain |
| 49 | chr17:46050800-46059000 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 50 | chr17:46050800-46059200 | Strong transcription | Liver | Liver |
