The 2.0 version of rSNPBase

Variant report

Variant rs71377341
Chromosome Location chr17:46121806-46121807
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:46115600-46123800 Weak transcription Brain Substantia Nigra brain
2 chr17:46115800-46122600 Weak transcription Esophagus oesophagus
3 chr17:46115800-46122800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr17:46115800-46122800 Weak transcription Brain Anterior Caudate brain
5 chr17:46115800-46122800 Weak transcription Placenta Amnion Placenta Amnion
6 chr17:46115800-46123200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr17:46115800-46123200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr17:46116000-46122600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr17:46116000-46122600 Weak transcription NH-A brain
10 chr17:46116000-46123000 Weak transcription NHLF lung
11 chr17:46116000-46124000 Weak transcription Brain Hippocampus Middle brain
12 chr17:46117000-46122600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr17:46119400-46123400 Weak transcription A549 lung
14 chr17:46119400-46123800 Weak transcription Primary hematopoietic stem cells blood
15 chr17:46120200-46122600 Enhancers Skeletal Muscle Female skeletal muscle
16 chr17:46120200-46122800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr17:46120200-46123000 Enhancers NHDF-Ad bronchial
18 chr17:46120400-46122600 Enhancers HSMM muscle
19 chr17:46120600-46122600 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr17:46120600-46122800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr17:46120600-46124200 Weak transcription H9 Cell Line embryonic stem cell
22 chr17:46120600-46124200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr17:46120800-46122400 Weak transcription Psoas Muscle Psoas
24 chr17:46120800-46122600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr17:46120800-46122800 Weak transcription Placenta Placenta
26 chr17:46121000-46122600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr17:46121200-46122600 Weak transcription Muscle Satellite Cultured Cells --
28 chr17:46121200-46122600 Weak transcription HMEC breast
29 chr17:46121200-46122600 Weak transcription K562 blood
30 chr17:46121200-46123400 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr17:46121400-46122400 Weak transcription HSMMtube muscle
32 chr17:46121400-46122400 Weak transcription NHEK skin
33 chr17:46121400-46122400 Weak transcription Osteobl bone
34 chr17:46121400-46122600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr17:46121400-46122600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr17:46121400-46122600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr17:46121400-46122600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr17:46121400-46122800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr17:46121600-46122000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr17:46121600-46122600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr17:46121600-46122800 Enhancers Skeletal Muscle Male skeletal muscle
42 chr17:46121800-46122800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr17:46121800-46124400 Enhancers Fetal Muscle Leg muscle

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Last update: Aug 31, 2015