The 2.0 version of rSNPBase

Variant report

Variant rs71377338
Chromosome Location chr17:46105435-46105436
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:46103200-46105600 Enhancers Pancreas Pancrea
2 chr17:46103600-46110600 Weak transcription Aorta Aorta
3 chr17:46103800-46107800 Weak transcription HUVEC blood vessel
4 chr17:46104200-46113800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr17:46104400-46107800 Weak transcription Adipose Nuclei Adipose
6 chr17:46104400-46107800 Weak transcription Brain Germinal Matrix brain
7 chr17:46104400-46109200 Weak transcription Left Ventricle heart
8 chr17:46104400-46109400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr17:46104400-46109600 Weak transcription Ovary ovary
10 chr17:46104400-46110600 Weak transcription Spleen Spleen
11 chr17:46104400-46111000 Weak transcription Lung lung
12 chr17:46104400-46114000 Weak transcription Liver Liver
13 chr17:46104400-46114000 Weak transcription Right Ventricle heart
14 chr17:46104400-46114200 Weak transcription Brain Substantia Nigra brain
15 chr17:46104600-46106000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
16 chr17:46104600-46107200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr17:46104600-46107600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr17:46104600-46107600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr17:46104600-46107600 Weak transcription Esophagus oesophagus
20 chr17:46104600-46107800 Weak transcription Muscle Satellite Cultured Cells --
21 chr17:46104600-46107800 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr17:46104600-46107800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr17:46104600-46107800 Weak transcription Colon Smooth Muscle Colon
24 chr17:46104600-46107800 Weak transcription NH-A brain
25 chr17:46104600-46107800 Weak transcription NHLF lung
26 chr17:46104600-46107800 Weak transcription Osteobl bone
27 chr17:46104600-46109000 Weak transcription Fetal Stomach stomach
28 chr17:46104600-46109200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr17:46104600-46109200 Weak transcription Stomach Smooth Muscle stomach
30 chr17:46104600-46113800 Weak transcription HSMM muscle
31 chr17:46104600-46114000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr17:46104600-46114000 Weak transcription Brain Hippocampus Middle brain
33 chr17:46104800-46107800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr17:46104800-46107800 Weak transcription Hela-S3 cervix
35 chr17:46104800-46107800 Weak transcription HMEC breast
36 chr17:46104800-46108000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr17:46104800-46109400 Weak transcription Placenta Amnion Placenta Amnion
38 chr17:46104800-46111000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr17:46104800-46113800 Weak transcription NHDF-Ad bronchial
40 chr17:46104800-46114000 Weak transcription HSMMtube muscle
41 chr17:46105000-46105600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
42 chr17:46105000-46107600 Weak transcription NHEK skin
43 chr17:46105000-46107800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr17:46105000-46107800 Weak transcription Fetal Muscle Leg muscle
45 chr17:46105000-46113800 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr17:46105200-46106200 Strong transcription Fetal Muscle Trunk muscle
47 chr17:46105200-46107800 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr17:46105200-46109400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr17:46105400-46107800 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr17:46105400-46114000 Weak transcription K562 blood

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Last update: Aug 31, 2015