The 2.0 version of rSNPBase

Variant report

Variant rs12994053
Chromosome Location chr2:86130435-86130436
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86118600-86131000 Weak transcription Thymus Thymus
2 chr2:86119800-86132200 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr2:86120200-86134200 Weak transcription Monocytes-CD14+_RO01746 blood
4 chr2:86120800-86131400 Weak transcription Pancreas Pancrea
5 chr2:86121400-86132000 Weak transcription Placenta Placenta
6 chr2:86121600-86131800 Weak transcription Adipose Nuclei Adipose
7 chr2:86122000-86134400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr2:86123200-86132400 Weak transcription A549 lung
9 chr2:86123200-86132600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr2:86124400-86134000 Weak transcription Lung lung
11 chr2:86127200-86132000 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr2:86127400-86132000 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr2:86127600-86130800 Weak transcription K562 blood
14 chr2:86128000-86132200 Weak transcription Spleen Spleen
15 chr2:86128400-86131400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr2:86128600-86141200 Weak transcription Primary T cells from cord blood blood
17 chr2:86128800-86130600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
18 chr2:86128800-86131200 Weak transcription Primary B cells from peripheral blood blood
19 chr2:86128800-86133200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
20 chr2:86128800-86133800 Enhancers Cortex derived primary cultured neurospheres brain
21 chr2:86129400-86130600 Weak transcription Brain Angular Gyrus brain
22 chr2:86129400-86132000 Weak transcription Fetal Muscle Leg muscle
23 chr2:86129600-86130600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr2:86129600-86130800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr2:86129600-86132000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr2:86129600-86132000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr2:86129800-86130600 Weak transcription Brain Cingulate Gyrus brain
28 chr2:86129800-86131400 Enhancers Brain Hippocampus Middle brain
29 chr2:86129800-86133200 Enhancers Brain Anterior Caudate brain
30 chr2:86129800-86133400 Enhancers Brain Substantia Nigra brain
31 chr2:86129800-86137800 Weak transcription NHDF-Ad bronchial
32 chr2:86129800-86138000 Weak transcription Fetal Thymus thymus
33 chr2:86129800-86141400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr2:86130000-86131800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr2:86130000-86132400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr2:86130000-86132400 Weak transcription Osteobl bone
37 chr2:86130000-86134000 Weak transcription Primary monocytes fromperipheralblood blood
38 chr2:86130200-86131000 Enhancers Brain Inferior Temporal Lobe brain
39 chr2:86130200-86132400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr2:86130400-86130800 Bivalent Enhancer HepG2 liver

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Last update: Aug 31, 2015